Gene Mmcs_1130 details

Gene Information

• Locus tag: Mmcs_1130
• Symbol: rplM
• ID: 4109968
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 1230518
• End bp: 1230961
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 638030252
• Product: 50S ribosomal protein L13
• Protein accession: YP_638299
• Protein GI: 161407224
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.916577
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCTACGT ACACGCCGAA GGCGGGTGAC ACCACACGTT CGTGGTACGT CATCGACGCC 
ACCGACGTGG TGCTCGGCCG GCTCGCCGTC GAAGCAGCCA AACTGCTGCG CGGCAAGCAC 
AAGCCGACAT TCACGCCCAA TGTCGACGGT GGCGATTTCG TCATCGTCAT CAACGCCGAG 
AAGATCGCCG TCAGCGGCGA CAAGCTCAAC AACAAGTACG CCTACCGCCA CTCGGGTTAC 
CCCGGCGGCC TGCGCCGGCG CACGATCGGT GAGCTGCTGA TCAAGCACCC GACCCGTGTC 
GTGGAGAACG CGATCGTCGG CATGCTGCCG CACACCAAGC TCAGCCGGCA GGTGCAGAAG 
AAGCTCAAGG TGTACGCGGG TCCGAACCAC CCGCACGCTG CACAGCAGCC GATTCCGTTC 
GAGATCAAGC AGGTGGCGCA GTGA 

 

Protein sequence

MPTYTPKAGD TTRSWYVIDA TDVVLGRLAV EAAKLLRGKH KPTFTPNVDG GDFVIVINAE 
KIAVSGDKLN NKYAYRHSGY PGGLRRRTIG ELLIKHPTRV VENAIVGMLP HTKLSRQVQK 
KLKVYAGPNH PHAAQQPIPF EIKQVAQ