Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1038 |
Symbol | |
ID | 4109877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1135118 |
End bp | 1135861 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638030161 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_638208 |
Protein GI | 108798011 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00179214 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG TGCTCGTCAC CGGTTGCTCC TCGGGCTACG GACTCGCGAC CGCGCAGCGG TTCCACCGCG AGGGCTGGAA CGTCGTCGCC ACCATGCGCA CACCCCGCGA CGAGGTGTTG GCGCCGGGGG AGCGGCTGAC CGTGCTGCCC CTCGACGTGA CGGACCCGGC AAGCATCGCC GACGCCGTCG CCTCGGCCGG TCCCATCGAT GTGCTCGTCA ACAACGCGGG CATCGGAGCC GTCGGCGCGT TCGAGGCCAT GCCGATGTCG CTCGTCCGGG AGTTGTTCGA GACCAACACC TTCGGGGTGA TGGCGATGAC CCAGGCGGTG ATTCCCCAGA TGCGCGAGCG GCGCTCGGGT GTCGTGGTCA ACGTGACGTC GTCGGTGACG CTGACGGCGA TGCCGCTGGC GGCCGCCTAC ACCGCGAGCA AGATGGCCGT CGAAGGGTTC ACCGCTTCGC TGGCGTTGGA GCTCGAATTC TTCGGTGTGC GAGCCAAACT CGTGCAGCCT GGCTACGGAC CGTCGACGCA GTTCGCCGCC AACGGCAGCG ATCGCATGGA CGGGGTGATC CCCGAGTCGT ATGCAGCGTT CGCGGAGCCG GTCTTCGCCG CATTCAGCCA ACCCGGTCCG GTGACCACTG CGGAGGACGT GGCGACGGTG GTGCTGCGCG CCGCCGGTGA CACGTCGGGA CAGTTGCGGT TTCCGGCCGG GGCGGATGCG GTGGCGTTGG CTGCTTCGGC CTAA
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Protein sequence | MKTVLVTGCS SGYGLATAQR FHREGWNVVA TMRTPRDEVL APGERLTVLP LDVTDPASIA DAVASAGPID VLVNNAGIGA VGAFEAMPMS LVRELFETNT FGVMAMTQAV IPQMRERRSG VVVNVTSSVT LTAMPLAAAY TASKMAVEGF TASLALELEF FGVRAKLVQP GYGPSTQFAA NGSDRMDGVI PESYAAFAEP VFAAFSQPGP VTTAEDVATV VLRAAGDTSG QLRFPAGADA VALAASA
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