Gene Mmcs_1014 details

Gene Information

• Locus tag: Mmcs_1014
• Symbol: rplD
• ID: 4109853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 1119671
• End bp: 1120330
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638030137
• Product: 50S ribosomal protein L4
• Protein accession: YP_638184
• Protein GI: 108797987
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAACCA CAATTGAGGT CAAGACGCCG GCCGGGACCA CCGACGGCTC CGTCGAGCTG 
CCTGCTGAGC TGTTCGACGT CGAGGCCAAC ATCGCGCTGA TGCATCAGGT CGTGACCGCG 
CAGCTGGCCG CCAAGCGGCA GGGCACGCAC TCGACCAAGA CCCGCGGTGA GGTCTCCGGC 
GGCGGCAAGA AGCCGTACCG GCAGAAGGGC ACCGGCCGCG CACGTCAGGG TTCGACCCGG 
GCGCCGCAGT TCACCGGTGG TGGCACCGTC CACGGCCCGC AGCCGCGCGA CTACAGCCAG 
CGCACCCCGA AGAAGATGAT CGCCGCCGCC CTGCGCGGGG CGCTGTCGGA CCGGGCGCGC 
AACGGCCGTA TCCACGCGGT CACCGAGCTG GTGGAGGGTC AGACCCCGTC GACCAAGAGC 
GCCAAGGCGT TCCTGTCGAC GCTGACCGAG CGTAAGCAGG TCCTGGTCGT GATCGGCCGC 
GCCGACGAGA CCAGCGAGCG CAGCGTGCGC AACCTGCCCG GCGTCCACAT CATCTCGCCG 
GATCAGCTCA ACACCTACGA CGTGCTCAAG GCCGACGACG TGGTGTTCAG CGTCGAGGCC 
CTGAACGCCT ACATCAACGC GCAGACAGCA CGTACTGAAA AGGAAGGTGC TTCGGCCTGA 

 

Protein sequence

MATTIEVKTP AGTTDGSVEL PAELFDVEAN IALMHQVVTA QLAAKRQGTH STKTRGEVSG 
GGKKPYRQKG TGRARQGSTR APQFTGGGTV HGPQPRDYSQ RTPKKMIAAA LRGALSDRAR 
NGRIHAVTEL VEGQTPSTKS AKAFLSTLTE RKQVLVVIGR ADETSERSVR NLPGVHIISP 
DQLNTYDVLK ADDVVFSVEA LNAYINAQTA RTEKEGASA