Gene Mmcs_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1008 
Symbol 
ID4109847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp1113441 
End bp1114085 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content71% 
IMG OID638030131 
ProductTetR family transcriptional regulator 
Protein accessionYP_638178 
Protein GI108797981 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.535946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCA CGAATGGCGA TCCCAGACCG GCCCGCTCGC GCGCCCGGCT ACTCGACGCA 
GCGACCATGC TGCTGCGGTC CGGCGGCCCC GGCGCGGTGA CGATCGATGC GGTCACCCGC 
AGCGCCAACG TCGCCCGGGC CACCCTCTAC CGGCATTTCC CCAGCGCCAA CGATCTGCTC 
GCCGCCGCCT TCCAGAGCCT GCTGCAACCC GCCCCGATGC CGCCGGCCGA GGGCAGCCTG 
CGCGATCAGC TCATCGCCGT CGTGGTCGGC TGGGCCGATC CCATCTCAGA GGCGCCCACC 
ACGCTCGCCG CCATGACGTG GCTCGCGTCC GGACCGGACC TCGGCCCATG GGCCGAGGCA 
CGCGATCCCG ACGCGGGAAG TTCGGTCGCC TCCCTGCGCG AGCGCATCCT GCAGTCCTAC 
TCGGCGCCGT TCGAGGCGAT CTTCGACGGT GCCCAGGCCG CCGAACTCGG CCTCACCGAC 
GTCGACCGGA TCCAGGCCAT CGCGCTGCTC ATCGGTCCAC TGATCCTCGG CCGGCTGAGC 
ACCCTGGCCG ATTTCGACTA TCACGCCTGC GCGGAGGCCG CCGTGGACGG ATTCCTGGCG 
ACCCACACCG TCAGCGCAAC GAGTACCGAA TCGGCAGGTG CTTGA
 
Protein sequence
MTATNGDPRP ARSRARLLDA ATMLLRSGGP GAVTIDAVTR SANVARATLY RHFPSANDLL 
AAAFQSLLQP APMPPAEGSL RDQLIAVVVG WADPISEAPT TLAAMTWLAS GPDLGPWAEA 
RDPDAGSSVA SLRERILQSY SAPFEAIFDG AQAAELGLTD VDRIQAIALL IGPLILGRLS 
TLADFDYHAC AEAAVDGFLA THTVSATSTE SAGA