Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0278 |
Symbol | |
ID | 4109124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 317392 |
End bp | 318828 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638029403 |
Product | virulence factor MCE-like protein |
Protein accession | YP_637455 |
Protein GI | 108797258 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGCC GCACCAAGTC CGCCAAGGTC CTGACCGTCG CGTTGGTGGC GTTGCTCGCC GCCGGCGCCG CGGTGATCGT GCGGCAGGAG TTCTTCGCGC CGCGGACCAT CACCGCGTAC TTCACCTCGG CCACGTCGAT CTACCCCGGT GACGAGGTGC GGGTCGTCGG AGTCCGGGTC GGCACCATCG AATCGATCGA GCCGGTCGGC GAACAGGCCA GGTTCACGCT CGCCGTCGAC CGCGGTGTGT CGATCCCCGC GGACGCCAAG GCGATCATCG TGGCGCCGAA TCTGATCGCC GCCCGCTACG TCCAACTCAC CCCGGCCTAC GAGTCGAGCG GTCCGGTGCT GCCCGATGAC GCCGTCATCG GTGTGGAGCG CACCGCAATA CCGGTCGAGT GGGACGAGGT CAAGGAGCAG TTGGCCAGGC TGGCAAGCGA ACTCGGCCCG TCCGGTGGAG TGTCCGACAC GTCGGTCAGT CGGTTCATCG ACAGCGCGGC CAATGCGATG GCCGGCAACG GCGACAAGCT GCGGGAGACC ATCTCCCAAC TGTCGGGGGT GGGGCGCATC CTCGCCGACG GCAGCGGCAA CATCGTCGAC GTCATCAAGA ACCTGCAGGT CTTCGTGACA GCCCTGCGGG ACAGCAACGT TCAGATCGTC CAGTTCCAGG ACCGTCTCGC CACCGTGAGC AGTGTGGTCG ACGGCAGTCG GGCGGAGATG GACTCGGCGC TGACCAACCT CGCCGAGGCC GTCGGAGAGG TGCAGCGCTT CATCGCGGGC AGCCGCAATC AGACCGCCGA ACAGATCCAG CGCCTGGCCA ACGTGACGCA GAACGTCGCC GACAACCGCG TCGCCCTCGA GAACGTCCTG CACGTCGCGC CGAACGCAAT CGGCAACGGG TACAACATCT ATCACCCGGA CACGGGCACG ATGCTCGGCG GGTTCGCGAT GGGCAACTTC GCCAACCCGG TACAGCTCAT CTGTTCGGCG ATCGGCGCGG TCCGCAACGC GACGGCGCCC GAGGCATCGA GGATCTGCGC GGAGTACCTG GGACCCGCCC TTCGCCTGTT GAACTTCAAC TACCTGCCCA TGCCGATCAA CGCGTACCTC AAGAAGTCGC CGAGCCCCGA GAACCTCGTC TATTCGGACC CCGCCCTGGC GCCCGGCGGC GCCGGGGGCA GCCCGACGCC CCCCGAGACG CCCCCGGCGG TGTCCGCCTT CACCGGCGGC GGGGACGTCC CACCCCCCGC GGGGTGGGGG ACACCGCCCG GTCCGCCGGG CACATACGCA CCCCACGGTC TACCGGCGAA CCCGACACCG GCGTTACTCC CGGGCGCACC CATCCCAGCC GGCCCCTCCG CCCCGGCCAC GCTGGACGAC ATGCTGCTTC CCGCGGAGGC ACCGCCGTCA CCACCGCAGG AAGGCCCACC CGCATGA
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Protein sequence | MIGRTKSAKV LTVALVALLA AGAAVIVRQE FFAPRTITAY FTSATSIYPG DEVRVVGVRV GTIESIEPVG EQARFTLAVD RGVSIPADAK AIIVAPNLIA ARYVQLTPAY ESSGPVLPDD AVIGVERTAI PVEWDEVKEQ LARLASELGP SGGVSDTSVS RFIDSAANAM AGNGDKLRET ISQLSGVGRI LADGSGNIVD VIKNLQVFVT ALRDSNVQIV QFQDRLATVS SVVDGSRAEM DSALTNLAEA VGEVQRFIAG SRNQTAEQIQ RLANVTQNVA DNRVALENVL HVAPNAIGNG YNIYHPDTGT MLGGFAMGNF ANPVQLICSA IGAVRNATAP EASRICAEYL GPALRLLNFN YLPMPINAYL KKSPSPENLV YSDPALAPGG AGGSPTPPET PPAVSAFTGG GDVPPPAGWG TPPGPPGTYA PHGLPANPTP ALLPGAPIPA GPSAPATLDD MLLPAEAPPS PPQEGPPA
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