Gene Mmcs_0253 details

Gene Information

• Locus tag: Mmcs_0253
• Symbol: sdhA
• ID: 4109099
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: -
• Start bp: 292950
• End bp: 294896
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638029378
• Product: succinate dehydrogenase flavoprotein subunit
• Protein accession: YP_637430
• Protein GI: 108797233
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.128459
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGCGA GCGACCCCCG ACCCGGCGAC TCCAGCGGTA TCGAGAGACA CCAGTACGAC 
GTGGTGGTCA TCGGTGCCGG CGGCGCGGGT CTGCGAGCAG TGATCGAAGC ACGCGAACGC 
GGCCTGAAGG TCGCCGTGGT GTGCAAATCG CTGTTCGGCA AGGCGCACAC GGTGATGGCC 
GAGGGCGGCT GCGCCGCATC GATGGGCAAT ACGAACCCGA AGGACAACTG GCAGGTCCAC 
TTCGGCGACA CCATGCGTGG CGGCAAATTC CTCAACAACT GGCGGATGGC CGAGTTGCAC 
GCCAAGGAGG CGCCCGACCG GGTGTGGGAA CTGGAGACCT ACGGCGCGCT GTTCGACCGC 
ACCAAGGACG GCCGGATCAG CCAGCGCAAC TTCGGCGGTC ACACCTATCC GCGGCTGGCC 
CACGTCGGTG ACCGCACCGG CCTGGAGATC ATCCGCACCA TGCAGCAGAA GATCGTCTCG 
CTGCAGCAGG AGGACAAGGA GGAACTCGGC GACTACGAGG CCCGCATCCG GGTGTTCGCC 
GAGTGCACCG TCACCGATCT GATCAAAGAC GGGGATCGGA TCGCGGGAGC CTTCGGCTAC 
TGGCGTGAGA GCGGCAGCTT CATCCTCTTC GACGCACCCG CGGTCGTGCT CGCCACGGGC 
GGAATCGGCA AGTCCTACAA GGTCACCTCG AACTCGTGGG AGTACACCGG CGACGGACAC 
GCCCTGGCGC TGCGGGCCGG CGCGACGCTG ATCAACATGG AGTTCATCCA GTTCCACCCC 
ACCGGCATGG TGTGGCCGCC CAGCGTGAAG GGCATCCTCG TCACCGAGGG TGTGCGCGGT 
GACGGCGGTG TGCTGAAGAA CTCCGACGGC AAGCGGTTCA TGTTCGACTA CATCCCCGAC 
GTGTTCAAGG GCCAGTACGC CGAGTCCGAG GACGAGGCCG ACCAGTGGCT CAAGGACAAC 
GACTCCGCGC GCCGCACCCC CGACCTGCTG CCCCGCGACG AGGTGGCCCG CGCGATCAAC 
ACCGAGGTGA AGGAAGGTCG CGGCACCCCG CACGGCGGCG TCTACCTCGA CATCGCGTCG 
CGCATGAGCT CCGAGGAGAT CAAGCGGCGG CTGCCGTCGA TGTACCACCA GTTCATGGAG 
CTCGCCGAGG TCGACATCAC CACCGACGAG ATGGAGGTCG GGCCCACCTG CCACTACGTG 
ATGGGTGGCA TCGAGGTCGA CCCGGACACC GGCGCCGCCA AGACGCCGGG CCTGTTCGCC 
GCCGGCGAGT GCGCCGGCGG TATGCACGGG TCGAACCGGT TGGGCGGCAA CTCGCTGTCG 
GACCTGCTGG TCTTCGGCCG CCGTGCCGGA CTGGGCGCCT CGGACTACGT ACGTGCCCTC 
GGCAACCGGC CGACGGTGTC GGAGGAGGCC GTCGAGGCGG CGCTCAAACT GGCGCTCGCC 
CCCTTTGACG GGCCGAGCGA GGGTCAACCG GAGAACCCCT ACACCATGCA GCTCGACCTG 
CAGGACACGA TGAACGAGCT GGTCGGGATC ATCCGCAAGG CCGACGAGAT CATCGAGGCC 
CAGGGAAAAC TCGACGAACT GCGCGATCGG TTCAAGCGCA TGAAGGTCGA GGGCAACCGG 
CACTTCAACC CCGGCTGGCA CCTCGCGATC GACCTGCGCA ACATGCTGCT GGTCAGCGAG 
TGCGTGGCCA AGGCGGCGCT GGAACGCACC GAGAGCCGCG GCGGCCACAC CCGCGACGAC 
TACCCGTCGA TGGAAGCGGA GTGGCGCAGA ACGCTGCTGG TGTGCCGGGC CCAGGGGGAC 
GACGTCGTCG TCCCGAGCGT CACCGTCACC CGCGAGGACC AGGTGCCGAT GCGCGACGAC 
CTGCTCGAGC TGCTGGACAT CGAAGAACTC CAGAAGTACT ACACCGACGA GGAACTCGCC 
AACCACCCGG CAAGGAGGGG CTCATGA 

 

Protein sequence

MAASDPRPGD SSGIERHQYD VVVIGAGGAG LRAVIEARER GLKVAVVCKS LFGKAHTVMA 
EGGCAASMGN TNPKDNWQVH FGDTMRGGKF LNNWRMAELH AKEAPDRVWE LETYGALFDR 
TKDGRISQRN FGGHTYPRLA HVGDRTGLEI IRTMQQKIVS LQQEDKEELG DYEARIRVFA 
ECTVTDLIKD GDRIAGAFGY WRESGSFILF DAPAVVLATG GIGKSYKVTS NSWEYTGDGH 
ALALRAGATL INMEFIQFHP TGMVWPPSVK GILVTEGVRG DGGVLKNSDG KRFMFDYIPD 
VFKGQYAESE DEADQWLKDN DSARRTPDLL PRDEVARAIN TEVKEGRGTP HGGVYLDIAS 
RMSSEEIKRR LPSMYHQFME LAEVDITTDE MEVGPTCHYV MGGIEVDPDT GAAKTPGLFA 
AGECAGGMHG SNRLGGNSLS DLLVFGRRAG LGASDYVRAL GNRPTVSEEA VEAALKLALA 
PFDGPSEGQP ENPYTMQLDL QDTMNELVGI IRKADEIIEA QGKLDELRDR FKRMKVEGNR 
HFNPGWHLAI DLRNMLLVSE CVAKAALERT ESRGGHTRDD YPSMEAEWRR TLLVCRAQGD 
DVVVPSVTVT REDQVPMRDD LLELLDIEEL QKYYTDEELA NHPARRGS