Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_0235 |
Symbol | |
ID | 4109081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 261773 |
End bp | 262636 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638029360 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_637412 |
Protein GI | 108797215 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0836166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATCTC CCACCGGTGA GACCGTGGCC GCGTTGGCCG CCGCCGCGCT GCCGGCGTTG TCGCGCGCCG AACGGCGGGT GGGTCGGGCG TTGCTGGCCG ACTATCCGAG CGCCGGGCTG GCCAGTGCCG CGCGGCTCGC CGAACGGGCC GATGTCAGCC CTCCGACCGT ACTGAGGTTC GCGCATTCGC TGGGCTTCGA AGGGTTCGCC GACCTGCAGG TCTCGCTGCG GGCCGAGATC TCGGCGATGT CGAGCGGACC GATCACCCGG CTGCCGGACG CGCCCGCCGC GGGCAGCCCG CTCGACCGGC TGCTCAATCA GGCCCGCGCG CAGAACGACC GCGCGTTGGA AACGCTCGCC CACCTGCCGG GTTCGTCACT GGAGGCGGCG GTGGCCCTGC TGGCCGACCA GACGCGGCCG CTCTTCCTGC ACGGCGGCCG GTTCTCGGTG CTGCTGGCCC ACCACCTGGG TGCGCACCTC GAACAGCTGC GCCCGGGGGT GCGACTGCTC GCCGACCCGT CGGGCCGCGA CCTCGGGGCG ATGATGGAAC TCACCCGGCG CGACGTGCTG GTCCTGTTCG ACTACCACCG CTACCAGGCC AGCGCCGTGG ACGTGGCGGC GCGTTTCCAC CGGGCCGGGG CCGCGGTCGT GCTGATCACC GACGACCTCG CCTGTCCGGT GGCCCCCGAC GCCGAAGTCG TGCTGGCCGC GTCGAGCACC GTGGGGACGG TGTATCAGAG CATGGCGGCG GGGTTTCTGC TCACCGAACT GCTCCTCCCG CTGGTGATGG AGGCGATCGG CGAACCCGCG CGCACCCGCA TGGCGCTGTG GGAGGAGCAG CGCCGCGGCG AACTGCTGCC ATGA
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Protein sequence | MPSPTGETVA ALAAAALPAL SRAERRVGRA LLADYPSAGL ASAARLAERA DVSPPTVLRF AHSLGFEGFA DLQVSLRAEI SAMSSGPITR LPDAPAAGSP LDRLLNQARA QNDRALETLA HLPGSSLEAA VALLADQTRP LFLHGGRFSV LLAHHLGAHL EQLRPGVRLL ADPSGRDLGA MMELTRRDVL VLFDYHRYQA SAVDVAARFH RAGAAVVLIT DDLACPVAPD AEVVLAASST VGTVYQSMAA GFLLTELLLP LVMEAIGEPA RTRMALWEEQ RRGELLP
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