Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_R0042 |
Symbol | |
ID | 4482832 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3622354 |
End bp | 3623850 |
Gene Length | 1497 bp |
Protein Length | |
Translation table | |
GC content | 55% |
IMG OID | 640720054 |
Product | 16S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000393609 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGAGTTTGAT CCTGGCTCAG AACGAACGTT GGTGGCATGC TTAACACATG CAAGTCGAAC GGTAGCAGGC CCTTCGGGGT GCTGACGAGT GGCGCACGGG TGAGTAACGC GTGGATGACC TACCCAGATG TGGGGGACAA CAGTTGGAAA CGACTGCTAA TACCGCATAA TCCCTAAGGG GGAAAGGCTT AGGCCGCATT TGGAGGGGTC CGCGTTGGAT TAGGTAGTTG GTGGGGTAAA GGCCTACCAA GCCGACGATC CATAGCTGGT CTGAGAGGAT GATCAGCCAC ACTGGAACTG AGACACGGTC CAGACTCCTA CGGGAGGCAG CAGTGGGGAA TATTGCGCAA TGGGGGAAAC CCTGACGCAG CAATGCCACG TGAATGATGA AGGCCTTCGG GTTGTAAAGT TCTTTTAGTA GGGAAGATAG TGACGGTACC TACAGAAAAA GCTCCGGCTA ACTCCGTGCC AGCAGCCGCG GTAATACGGA GGGGGCAAAC GTTGTTCGGA ATCACTGGGC GTAAAGGGCG CGTAGGCGGT TATCTAAGCC AGAAGTGAAA TCTCGGGGCT CAACCTCGAA ACTGCTTTTG GAACTGGAAG ACTAGAATCC GGTAGAGGAT GGTGGAATTC CCCGTGTAGA GGTGAAATTC GTAGATATGG GGAGGAACAC CGGAGGCGAA GGCGGCCATC TGGGCCGGTA TTGACGCTGA GGCGCGAAAG TGTGGGTAGC GAACAGGATT AGATACCCTG GTAGTCCACA CCGTAAACGA TGAGTGCTAG TAGTTGCGGG TATCGACCCC TGCGGCTACG AAGTTAACAC GATAAGCACT CCGCCTGGGG AGTACGGCCG CAAGGTTAAA ACTCAAAGGA ATTGACGGGG GCCCGCACAA GCGGTGGAGC ATGTGGTTTA ATTCGATGCA ACGCGAAGAA CCTTACCTGC TTTTGACATC CTTGGAACCT TACGGAGACG TAGGGGTGCT TTTCGGAGAA CCAAGTGACA GGTGCTGCAT GGCTGTCGTC AGCTCGTGTC GTGAGATGTT GGGTTAAGTC CCGCAACGAG CGCAACCCCT GCCTTTAGTT GCCATCATTA AGTTGGGCAC TCTAGAGGAA CTGCCGGTGT TAAGCCGGAG GAAGGTGGGG ATGACGTCAA GTCATCATGG CCCTTATGGG CAGGGCTACA CACGTGCTAC AATGGCGGAT ACAGAGGGCG GCGAAGCAGT GATGTGGAGC GAATCTCTTA AAGTCCGTCT CAGTTCGGAT TGGAGTCTGC AACTCGACTC CATGAAGTTG GAATCGCTAG TAATCGCGGA TCAGCATGCC GCGGTGAATA CGTTCCCGGG CCTTGTACAC ACCGCCCGTC ACACCATGGG AGTTGGTTTT ACCCGAAGCC GGTGGCCTAA CCTTTCGAGG GGGGAGCTGT CTACGGTAAG ATCAGCGACT GGGGTGAAGT CGTAACAAGG TAGCCGTAGG GGAACCTGCG GCTGGATCAC CTCCTTT
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Protein sequence | |
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