| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3747 |
|---|
| Symbol | |
|---|
| ID | 4483405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 4704617 |
|---|
| End bp | 4705114 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639724503 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_867638 |
|---|
| Protein GI | 117927021 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00168857 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000731696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGAT ACATACTGGT TCTGTTTATC CTAACGATGA TCCTATGGAT GTTAGCAAAA
TTGCGCGATA TTCGCGAGCG CCGTGCAGCC GACATCATGC CAACCGATGA GCACACCGTG
CTGTTTGGTC TTTTTTTGAC ACTCTCCAAA GCGGCGGTAT CCTATTACCG GGATTATGGA
AACTACCCCA CTATTATTCA GGGTGCCCCC GACGGCATGG TGGAAAAAGG CTATTTGGAG
CACTCGGAAC TGGCCAATAT GACCAACGTG TTACCGCTCT TTTCCATCGT TATTGCCGAA
TATAATGGCT ATGGTATCTG CCTGGAAAAT TGTACGTCAT CCATCACCGA AGGCATTTTG
GAACGCAACA GCGACATGGG CGGTAAACTC CACTTTATGG ACCATAAATC CGACCGTTAC
GTTACTCTTA CTCCACCCAT TCGTAATGAC TTTATCAACC TGACGCTGCC GTTGCCGTTG
AAACCCAAAT CCGCTTAA
|
|---|
| Protein sequence | MFRYILVLFI LTMILWMLAK LRDIRERRAA DIMPTDEHTV LFGLFLTLSK AAVSYYRDYG
NYPTIIQGAP DGMVEKGYLE HSELANMTNV LPLFSIVIAE YNGYGICLEN CTSSITEGIL
ERNSDMGGKL HFMDHKSDRY VTLTPPIRND FINLTLPLPL KPKSA
|
|---|
| |