| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3739 |
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| Symbol | |
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| ID | 4483397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4695377 |
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| End bp | 4696213 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639724495 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_867630 |
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| Protein GI | 117927013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000351695 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGTGAAC GCTTTATTAA AATGCACGGC CTGGGCAATG ATTTTGTGGT GTTGGATCAC
CTGGAGAGCC CTCGTGAATT AAGCCCCCAG GAGGCCCGCT TTTGGGCCGA CCGGCGGCGC
GGCGTGGGGT GTGATCAGGT GGTGCAGCTC CTGCCCGGCG TCGAGGGGGG AGATGCCCAG
ATGCGCATCT ATAACCCGGA TGGCTCCCGG GCGGAGATGT GCGGTAATGC CATGCGCTGT
GTGGGTCTCT ATCTGCATGA GCAGCGGGGG ATGGCGGCGG CCTTGGCGGT GGAGACGCTG
GCGGGGATCA TGCGCCCACA GGTGACGTCG GCCTTGGCCA TTACGGTGGA TATGGGTCGG
CCCCAATGGG CAGGGCGGGC GATTCCGCTG GACCAGGATG GGGAGATGAT TGACGCACCG
CTGGAGGTTG GCGGGCAGAG CTACCGCATG ACGGCGCTCT CCATGGGCAA CCCCCATGGG
GTGGTGCGGG TCGCGGATGC CGAAGGGTTT GAGCTGGCCA AGGTGGGGCC TTTGGTGGAG
CACCATGCGC TGTTTCCCAA TCGGATTAAT TTTGAGGTGG TGCAGGTGCT CAGCCGGTCG
CGTATCCGCA TGCGGGTATG GGAGCGGGGG GCGGGTATCA CCCCGGCGTG TGGCACTGGG
GCCTGTGCGG CGGCGGTGGC CTGCATGCGG CAGGGTTGGG TGGAGCGCGA CTGTACGGTG
GTGCTGGATG GGGGTGAGCT ACAGATTGTT TGGTTGGAGA GTGATCGGGT AATGATGAGC
GGGCCCGCGA CAGAGGTCTT TCGGGGTGAG CTGGTGGGGC TACCCGCTGG GTTTTAG
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| Protein sequence | MGERFIKMHG LGNDFVVLDH LESPRELSPQ EARFWADRRR GVGCDQVVQL LPGVEGGDAQ
MRIYNPDGSR AEMCGNAMRC VGLYLHEQRG MAAALAVETL AGIMRPQVTS ALAITVDMGR
PQWAGRAIPL DQDGEMIDAP LEVGGQSYRM TALSMGNPHG VVRVADAEGF ELAKVGPLVE
HHALFPNRIN FEVVQVLSRS RIRMRVWERG AGITPACGTG ACAAAVACMR QGWVERDCTV
VLDGGELQIV WLESDRVMMS GPATEVFRGE LVGLPAGF
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