| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3704 |
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| Symbol | |
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| ID | 4481041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4657268 |
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| End bp | 4657930 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639724460 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_867595 |
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| Protein GI | 117926978 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0339608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAAGT CGGTCATGGA ACTGATAGTG TTTACCCAAC CCACCATACA GGCAAGGCTG
TTGATTGCGT ATCTGGAGAG AGAGATGGGG CGGGCATGTA CGCAGCAAGC GGGCACGGCA
CCCACAGCGT TCACGGTGCG TTCCAGTTTG GGTAGCGTAT TGTGGATTTG GGATTGGCAG
CAGTCAGGGG ATAAAGAGCG CATCTTTTCG CTGTTGAGCA ATCAGAGTGG TGCCGTTCCC
TTGGTTCTAT TGATCAATTT GCCCGATGAT ATCAGCTTGG AACTGCGTGC TTTGCAGTCG
GGTATACGGG GGGTTGTCAC CTTTGACACA CCCCTTGAGC AGTTAATTCG CGCGGTGGAG
GCGGTGGAGC GGGGCGAGCT ATGGTTTTCA CGTAAAACCT TGACGCGGGG TCTGATTGAG
CGGGGGCCGC AGAGTGGCAC ACTGCCTAAG CGCAGCCACT GGCCCAATGG CATTACCAGC
CGCGAAGCGG AGATATTGCG TTTGATCACG AGTGGTTGCA GTAATAAGCG TATTGCTTAT
GAGCTGGGCA TCAGTCTACA TACGGTTAAG GCGCACACCT ATAATTTGTA CCGCAAGATT
GATGCTTCTA ACCGCATGGA TGCCGCCAAC TGGGCGGAGA TGAATCTTTG GAATCAGGGA
TAA
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| Protein sequence | MSKSVMELIV FTQPTIQARL LIAYLEREMG RACTQQAGTA PTAFTVRSSL GSVLWIWDWQ
QSGDKERIFS LLSNQSGAVP LVLLINLPDD ISLELRALQS GIRGVVTFDT PLEQLIRAVE
AVERGELWFS RKTLTRGLIE RGPQSGTLPK RSHWPNGITS REAEILRLIT SGCSNKRIAY
ELGISLHTVK AHTYNLYRKI DASNRMDAAN WAEMNLWNQG
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