Gene Mmc1_3671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3671 
Symbol 
ID4481481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4609334 
End bp4610401 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content54% 
IMG OID639724427 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_867562 
Protein GI117926945 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG CTGTTCGATT TAACGCTGCC CAACTGCTGG ATCAAACCTC CATCGGCATC 
ATTGCCCTGG ATTGTGACAA TGTGATTCAG CGGGTCAACA CCGCAGCTGA GAAGATTTTA
GACCGTCCAC GTCAACACCT TCTGCACACG CCGTTAGAGA AGGTGCTGCC CGGTCACCCT
GTGGCGCTGG ACCTTATCAG CCGCGCCAGT AATTTGTTGA TGCCCTGCCG CTTTCGCGTG
GCTCAACTTT CACCATCCCC CGATATTAAT CTGCTGGTCT CCCTGACCGC GACCCCTTAC
ATGCGTGAGG ATGGACAGCT ACAGGGCACC ATTTTAGAGA TGGAGGAGGT CGGCTCGGCA
GAACAGTTGG AAGAGGGCCG CCGCCTGAAT GAAACCCTGG ATTCTCTTGG CTCGCTGGCT
TTGGCGGTGG CCCATGAGGT CAAAAATCCG CTGGCTGGCA TCCGGGGTGC CGCGCAGCTA
TTAGAAATGG AGAGTACCAG CGAAACCGGG GCAATCTGTA CCGAGCTGAT CCGCTCCGAG
GTGGACCGCA TCAGTCGGCT GTTGGATAGT TTGCTGGGGT TGGCCGAAGA CCACCCGATC
AACCAAAAAA ACATCAATAT TCATGAGGTT CTGGATCATG TGGTACGCCT CTGTTCCAGC
TCTGGGGCCC ATTTGGTACG GGATTATGAT CCCTCTCTGC CGGAGATCTC AGGGGATCGG
GATAAGTTGA TACAGCTCTT TCTTAACCTT ATCTCCAATG CCACGGAGGC CACCGGTAAA
GAGGGTGAAG TGCGTATCTC CAGCCGCATT TCTAAGCAGA TTCGGCTTAC CCAGGGGCGT
CGACAACAGC ATATTGTGGT GGAGATTCGG GACAATGGTC CAGGTATTCC CCATGAGCTA
CGCAAGCGGA TTTTTCTACC CTTTGTTACC ACCAAATCCA ACGGCACGGG GTTGGGTTTG
GCGATTTCAC AAAAGATTGT ACACGACCAC GATGGGCAGA TGGCCCTAGA GAGTCGACCA
GGGGAGACCG CGTTTCGGGT TTTTCTGCCC CTGAAAACCA TACGCTAA
 
Protein sequence
MDKAVRFNAA QLLDQTSIGI IALDCDNVIQ RVNTAAEKIL DRPRQHLLHT PLEKVLPGHP 
VALDLISRAS NLLMPCRFRV AQLSPSPDIN LLVSLTATPY MREDGQLQGT ILEMEEVGSA
EQLEEGRRLN ETLDSLGSLA LAVAHEVKNP LAGIRGAAQL LEMESTSETG AICTELIRSE
VDRISRLLDS LLGLAEDHPI NQKNINIHEV LDHVVRLCSS SGAHLVRDYD PSLPEISGDR
DKLIQLFLNL ISNATEATGK EGEVRISSRI SKQIRLTQGR RQQHIVVEIR DNGPGIPHEL
RKRIFLPFVT TKSNGTGLGL AISQKIVHDH DGQMALESRP GETAFRVFLP LKTIR