Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3669 |
Symbol | |
ID | 4481479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4607587 |
End bp | 4608243 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639724425 |
Product | small GTP-binding protein |
Protein accession | YP_867560 |
Protein GI | 117926943 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGA GCAAGTTGGA TACCGGTTTT AATGCTGAAT TTGTTGTCGG TGCGGTTAAA CCGGAACAAT ACCCCGATGA CGGCCTGCCG GAGGTCGCCT TTGCGGGCCG CTCCAATGTG GGCAAGTCAT CGCTGCTGAA TAAATTGTTA AACCGACGTC AATTGGCGCG GGTGAGCAAC ACACCGGGTC GCACGCGGGA GCTTAATTTT TTCCGCATCA ACCAAGCCTA TTATTATGTA GATCTGCCCG GTTATGGCTA TGCCAAGGTG GGACGGGGGC AGAGAGAGGT GTGGGATCGG GGTATTGGTC TCTACTTCAA CAGCCGTCGT GATCTGCGTG CGGTGATTTT GTTGCTGGAC ATTCGGCGTG GCATGACCGA GCAGGATCAA GCGATGCTGG ATTTTATCTT TAAGATGGGT CTGCCGGTGC TGCCGGTATT AACCAAAAGC GACAAGCTTA ATGCCAACCC TCGCCGTGAG GCGATCAAGG CCATGCGCTT AATGGTGGCC GAAAAAGTGC CCCTGGCGGT GGCGCCCTTG CTGGTGACTT CATCGTCCAA AGGGGATGGT ATTTTGGAAC TACGCCAAAC CCTAGCGACC CTATTGCAGC GTGAGTTGGG GGTTGGCGAT CCACCCCCGC CTGACCCTTG CCCATAA
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Protein sequence | MDKSKLDTGF NAEFVVGAVK PEQYPDDGLP EVAFAGRSNV GKSSLLNKLL NRRQLARVSN TPGRTRELNF FRINQAYYYV DLPGYGYAKV GRGQREVWDR GIGLYFNSRR DLRAVILLLD IRRGMTEQDQ AMLDFIFKMG LPVLPVLTKS DKLNANPRRE AIKAMRLMVA EKVPLAVAPL LVTSSSKGDG ILELRQTLAT LLQRELGVGD PPPPDPCP
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