Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3632 |
Symbol | |
ID | 4480532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4562748 |
End bp | 4563941 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639724381 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_867523 |
Protein GI | 117926906 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.638594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGCGA CCATTACCGA CCATAAAGAG TTTCAAAACT ACGCCATCAA CTTTGGCCCA CAACACCCGG CTGCCCATGG TGTGTTGCGT CTGTTGCTGG AGTTGGATGG CGAAGTGGTA GAGCGGGCCG ACCCCCATGT GGGTCTGTTG CACCGTGGCA CGGAAAAGCT GTTGGAGCAG AAGACCTATA TTCAGGGTAC CCCCTATTTT GACCGTCTCG ACTATATGTC CATGATGAGC GAAGAGCACG CATGGGTCAT TGCGGTCGAA CGACTGGGCC AAATTGAGGT GCCGGAGCGT GCGCAATATA TCCGCACCAT CTATGCGGAG ATCACCCGTT TTATCAACCA TCTGTTGTTC TTTGCGGCCC ACGGGTTGGA TGTGGGTGCC ATGACCATGT TCCTCTACTG CTTCCGTGAG CGTGAGGAGC TGATGGACAT CTATGAGGCG GCCTGTGGTG CGCGTATGCA CGCCAACTAT TTCCGCCCTG GTGGTGTGGC CCGTGATCTG CCAGATGGTT TGGAGCAGCG CATTCGTGAC TTCTGCAACC ATTTTCCCAG CAAGTTGGAT GAGTACGAAA CCCTGTTGAC CAACAACCGC ATCTGGAAAC AGCGCTTGGT GGATATTGGC AAGGTCAGCC AGGAAGATGC CTTTAGCTGG GGCTTTACCG GACCCATGCT GCGGGGCAGT GGGGTCGCCT TTGATCTGCG TAAGGCCGAG CCCTATGACG CCTATGACCG GGTTGAGTTT GATATTCCCG TGGGTAAAAA CGGCGACAGC TACGACCGCT ATCTGGTGCG TATTGAGGAG TGTCGTGAAG GGGTGAAGAT TATCCAGCAG TGCCTGGATC AGATGCAGCC CGGACCGGTA CGCAACGATA ATTTTAAAAT CTCCATGCCC TACCGTCAGG ATATGCAACA GGATATGGAG TCGATGATCC ACCACTTTAA ACTTTGCACC GAGGGCTTTA ACCTGCCTGC GGGTGAGGTC TATGCGGCGG TGGAGACACC CAAGGGTGAG TTGGGGGTCT ATCTGGTTTC CGACGGTGGC AACAAACCGT ACCGGGCGCG AATTCGCGCG GCAGGGTTTA ACCATCTGCA AGCGGTTAAG GAAATGGCCC GTGGTCATAT GATTGCCGAC GTGACCACCA TCATCGGTAG CATCGATATC GTGTTTGGCG AAATCGACCG CTAA
|
Protein sequence | MPATITDHKE FQNYAINFGP QHPAAHGVLR LLLELDGEVV ERADPHVGLL HRGTEKLLEQ KTYIQGTPYF DRLDYMSMMS EEHAWVIAVE RLGQIEVPER AQYIRTIYAE ITRFINHLLF FAAHGLDVGA MTMFLYCFRE REELMDIYEA ACGARMHANY FRPGGVARDL PDGLEQRIRD FCNHFPSKLD EYETLLTNNR IWKQRLVDIG KVSQEDAFSW GFTGPMLRGS GVAFDLRKAE PYDAYDRVEF DIPVGKNGDS YDRYLVRIEE CREGVKIIQQ CLDQMQPGPV RNDNFKISMP YRQDMQQDME SMIHHFKLCT EGFNLPAGEV YAAVETPKGE LGVYLVSDGG NKPYRARIRA AGFNHLQAVK EMARGHMIAD VTTIIGSIDI VFGEIDR
|
| |