| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3573 |
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| Symbol | |
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| ID | 4482089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4485525 |
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| End bp | 4488308 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724322 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_867464 |
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| Protein GI | 117926847 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
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| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000390838 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAACA ATCTGTCTGT GCGGGTCAAG GTGACCGTTG GTTTTATCAT TCCTTTGGTA
CTGCTGTTTA TACTGGGCAT CTGGAGCACC ATGGTGAGCA GCGAGGTGGA AAAGCGCTCT
ATTGATGCCC GTACGGTCAG TTTTAAGTAT GGCATGCTGG CCACCCAGAT GGAAAAACAG
GTGATCCAAA TTCAGCAGTG GTTGACCGAT ATTTCAGCGA CGCGCGGCTT AGATGGTCTT
AACGATGGCT TTGCCGAAGC TGAGGTTAAC TATAAAGGCC TGATGGCCAA TATTGCAGAT
TTCAAGGTGC ATTTTAAAGC CAGTGGTGCG TTGAAAGATG CCACGTCCAT GGAGGAGCTG
GGTAAACGGG TCACTAGCTT TTATCGTGTC GGTAAGCTGA TGGCAGAGGC TTATATTGCA
GAGGGGCCAA GTGGTGGTAA TAAACGCATG GCCGCCTTTG ATGGTGAATC TGAAGCATTG
CAGGAAGTGC TGCAACCCTT TTTGAAAGAA CAACTTGCGC GGGCCAATCG GAATTTAGAT
ACCATTGAGC AGCGGGTCAA CAGTCTCAAG CAAGGTATTA CCTATTTAAC CCTCTTTTCG
GTGATCTTTC TGGTGGGTAC TGGTTACTCC ATTGGTCGGG CCATAACCCG GCCATTGAAT
CAGATATCCA GTGTGATGAC CGAGATATCT AAAGGGGATT TGACGGTACG TACAGAGCTG
GGCGAGCGTC AGGATGAGAT GGGTGTGGTG GCAAAGCATA TCAACTTGCT GGTAGGTGGT
TTGAGTGAGA ATGTGCGGTT GACCAATCTA CAGGCTTCAA ACATAACCAC GTTTGTGCAG
GAGATTTTGA CGCTGCGTTC GGAACTGAGT GATACCAACA TTGCTTTGGG TGAGATCGCG
CACAAGGTTG ATCAGGACAA TCAGGTTCTC AACGATGAGA TTGGCACCAT CCGCTCGGGT
ATGGATGAGA CCGTTACCAA TATGGGCTCG GTATATGAGG CGGCGGCGCA GGTGAGTAAG
CAGGTCAATC ATATTGCGCG CACCGCCGAG GAGGCCAGCC AGAGTGTGGG TACCATGGCG
GTTAATGCCG AAACCATGGC ACTAAATGTG ACCGGTGTTA ATGAGCAGCT TACCCAGGTC
AACAGATCGG TGGATCAGGT AGCCGCCTCG GTTAAGGAGA TGCAGCGTTC GTTGGGGGAT
GTTCATAATC GGTGTCAGGC AGCGGTTGAG GCAACAGCGT ATACCGAGCA CCGCGCCCAA
GAAGCGATGT TGGGTATGCA GCGTCTCTCT GAGACGGCCA ATAACATTGG CAAGGTTGTG
GATGTGATCA ATGATATTGC CGAGCAGACC AACATGCTGG CCCTTAATGC CTCCATTGAG
GCTGCCGGTG CAGGGGAAGC CGGCAAGGGT TTTGCGGTGG TTGCCAATGA GGTTAAGGCG
TTGGCCAGTC AGACGGCAGA TGCCACGCAG ATGATTTGGG GCAATATTGA TGAGATTCAG
GATCAATCCA AAGCGGCGGT GGCGTTGACC GAGGACATTA CCCAAGCCAT TGGTCGGATT
GGCAGTGCCA ATGCGGAGAT CAATGCTGCT GTAGATGAGC AGCACGCCGC CATTGGCGAG
ATTGCTGGGT CGGCCAATGC GGTCTCCCGT GCCGCCCATG AGGTGACGGC TAAAGTGGAG
GTGTTACAGT TGGCGGTACG CGAGGTTGCG ATGGCTGCTG CGGAGGCTGC CCAGTCTACC
GTGGCCATTG CCGATGCCAC CGAAGAGATT CGTCAAGCGG CGCAAAATAT GGATAGCCGC
ACCAGTCGCG CGTTAGAGGC ATCCAAGCAG ATTCAACAGG CGGTGGGTAA CACGGAGCAG
ATCTCCTATC AAGTGCGCGA GAGCGTGGAG CACTCATTGG ACGTGGTGCT CTCCATGAGT
GGAACGGTCA GGCATTTTCA GGCCGTGGGT GATGTGGCCA GTGGTATTAG TGATGCGCTT
TACACCGCGC AGTGCCGGGT GGATATTGGT CCAGAACCCT TTAATATCCG TCTATTAAAA
GAGGCCACGC TGTCGATTAT GGGACAGCTA AACCGTGGGG TGACGGTGGG TGATGCTTCA
TTGGTGAGTG ATTTTGGGGA TACACAAGCC AGTACGGTGG GTAAATATCT GGCCAATGAG
ATCCCCGAAG CATTAAAACG CACAGAGCTT TACCAAAAGG TGTTGGGGAC CCATGAGCAA
TTACATCATT CGGCGCGGGA TGTGATTAAG CTGTTAAGGG CCTCTGAGAC CGAAGGGGTT
GAGCATGCGA TGCGCTATTT TAACCAGTTG CGCGAAAATT TCTTTGCTCA GCTCAACCAA
TTGTATATGG GTGGAACGTT TGATGTGGGG GCATACGCCC CGGCCATCGC TTGGCGCAAT
GAATATTCAG TGGGTGTGCA GTTGTTGGAT GCTGATCATA AGCAATTGAT CAACCTTATC
AATGAATTGT CTATAGCGGT TAAGGATGAT CGGGAGAACT TCTTGCAGCA TGTCTATGAG
CGCTTGGTCA ACTACGCGAC GACCCATTTT GCCCGCGAAG AGCGCATGAT GGCAGAGATC
GGTTATAGCG CACTACCCAG TCAAAAGGCG GAGCATGAGC GTTTTCTCAG TACGGTGGGG
AGCAAGCGGG ATATTTTGTT AAATGGTGCC GATCCAAAGG TCGCCACAGA GATTATCGAT
TTCCTAAAAG ATTGGCTGGT TGGTCATATT ATGAAGAGCG ATATGGCCTA CAAACCCGCT
TTTGCGGAAA AAAATGTGAG GTAA
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| Protein sequence | MFNNLSVRVK VTVGFIIPLV LLFILGIWST MVSSEVEKRS IDARTVSFKY GMLATQMEKQ
VIQIQQWLTD ISATRGLDGL NDGFAEAEVN YKGLMANIAD FKVHFKASGA LKDATSMEEL
GKRVTSFYRV GKLMAEAYIA EGPSGGNKRM AAFDGESEAL QEVLQPFLKE QLARANRNLD
TIEQRVNSLK QGITYLTLFS VIFLVGTGYS IGRAITRPLN QISSVMTEIS KGDLTVRTEL
GERQDEMGVV AKHINLLVGG LSENVRLTNL QASNITTFVQ EILTLRSELS DTNIALGEIA
HKVDQDNQVL NDEIGTIRSG MDETVTNMGS VYEAAAQVSK QVNHIARTAE EASQSVGTMA
VNAETMALNV TGVNEQLTQV NRSVDQVAAS VKEMQRSLGD VHNRCQAAVE ATAYTEHRAQ
EAMLGMQRLS ETANNIGKVV DVINDIAEQT NMLALNASIE AAGAGEAGKG FAVVANEVKA
LASQTADATQ MIWGNIDEIQ DQSKAAVALT EDITQAIGRI GSANAEINAA VDEQHAAIGE
IAGSANAVSR AAHEVTAKVE VLQLAVREVA MAAAEAAQST VAIADATEEI RQAAQNMDSR
TSRALEASKQ IQQAVGNTEQ ISYQVRESVE HSLDVVLSMS GTVRHFQAVG DVASGISDAL
YTAQCRVDIG PEPFNIRLLK EATLSIMGQL NRGVTVGDAS LVSDFGDTQA STVGKYLANE
IPEALKRTEL YQKVLGTHEQ LHHSARDVIK LLRASETEGV EHAMRYFNQL RENFFAQLNQ
LYMGGTFDVG AYAPAIAWRN EYSVGVQLLD ADHKQLINLI NELSIAVKDD RENFLQHVYE
RLVNYATTHF AREERMMAEI GYSALPSQKA EHERFLSTVG SKRDILLNGA DPKVATEIID
FLKDWLVGHI MKSDMAYKPA FAEKNVR
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