Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3558 |
Symbol | fadE |
ID | 4482513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 4467745 |
End bp | 4470081 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639724307 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_867449 |
Protein GI | 117926832 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCTAT GGCTTGTGGT AATACCGCTG CTCACGCTAT TTCTGGTGAT CAGCCTACCG ATGTTAAGAC GTCGTTTGCT GTCGGGACCC ATCATGGCGT TGATGCAAGG TGCCATGCCG CCCCTTTCCC AGACCGAGCG CGAGGCGCTG GAGAGCGGCA CCGTTTGGTG GGAGCGGGAG CTCTTTTCTG GGCGGCCCGA TTGGTCCAAG TTGCAAAATC TGCCCGCAGA CACCTTGAGT AAGGAGGAGC AAGCCTTTCT GGAGGGTCCA GTCCAGCGGC TCTGCGCCCG TTTGGATGAG TGGCGTATTA AGCAAGAGGA GCACGACCTG CCCGCCGACC TCTGGGAGAT GCTTAAACAA GAGGGCTTTT TTGGCATGAT TATCCCCCGA GAATATGGGG GATTGGGCTT CTCGGCGCGG GGTCATTCGG CGGTGATCAC CAAGATTGCC AGCCGCAGTG TTACCGCAGC GGTAACGGTG ATGGTGCCCA ACTCATTGGG ACCGGCGGAA CTGCTGATGC GCTATGGTAC CCCTGAACAG CAGCGTTACT ATCTACCCCG TTTGGCCAAT GGGCGCGAGA TCCCCTGTTT TGCCCTTACC AGCCCACGGG CCGGTAGCGA TGCGGGGGCG ATTCCAGATA CCGGTGTGGT ATGTCGGGGT AACTTCCGGG GTGAGACGGT GGTGGGTATC CGCCTCAATT GGGATAAACG CTACATCACC CTAGCACCGG TGGCCACCCT ATTGGGGCTG GCTTTTCGGC TCTATGATCC AGATAACATA ATGGGCAATA TACGGGATCT GGGGATAACT CTGGCATTAA TTCCCACCCA AACCGCCGGT GTCTCCATTG GCACCCGGCA TGACCCCCTG GGGGTTCCTT TCCTCACCGG TCCGACCCGT GGTCACCAAG TTTTTATCCC CATGAGCTAT TTAATTGGCG GCGAGCAGGG CATTGGCCAG GGTTGGCGAA TGTTGATGGC GTGCCTCTCT GAAGGGCGGG GTATCTCATT GCCTGCGCTC AGTGTGGGTG CGGCCAAGCT GGCGGCGCGT AGCAGTGGCA ACTATAGCCG GGTGCGCAAA CAGTTTGGGC TCGCCATAGG CCGGTTTGAA GGGGTACAAG AGGCGCTGGG CCGGATTGGT CTGAACGCCT ATCGTATGGA GTCTGCCCGC ACTCTGACCG TAACCATACT AGACCAAGGT GAGCGCCCCA GTGTGGCGGC GGGTATTGTT AAGTATCACC TAACCGAAGG GATGCGCCAG ACCATCAATG ATGCCATGGA TATATGGGGG GGTACCGCCA TCTGTCGGGG TCCCCATAAT TTACTGGCGC ACGCCTATCA GGCTATTCCC ATCGGCATCA CCGTGGAGGG GGCCAATATC CTGACCCGTA CCATGATGAT CTTTGGACAA GGGGCCATTC GTGCCCACCC CTACCTGTTG CAAGAGATGG AAGCGGTCAC GGGGCAACAG CCGGTGGCAG AGCGAGTCAT TGCCTTTGAC CGGCTATTAT GGGCGCATGT GGGTTACACC ATGATGAATG GTCTGCGGGC TCTGGTTTAT GGGCTGTTGG GGAACGCTGG TGCCGCAGCC CCACAAGGGG TGTGCGCTAC CGAACGCAAG TGTTACCAAC GCATTAGCCA TTGGAGTGCC GCCTTTGCTT TTATGTCGGA CCTCGCCCTG GCGCGGTTGG GGGGGTCTCT CAAACGGCGT GAATCACTGT CGGCGCTGTT GGGGGATGCT TTGAGCCATC TTTACATGGC CAGTGCGATT CTGCATCGCT ACAGCAAGGA TGGTTCCCCG CCCCAGGATC GCCCCATCAT GGAGGCCGCC CTAGAGGATA GCCTATTGCA GGTGCGTCAA GCGCTGGTGG AGGTGGTGCG TAACTTCCCC GATCCTGTGG TGGCGCTGCT CATGCGTCTG GTGGTGTTCC CCACCGGTTT AGCCCAACGC CGTTTGCCCC AACACCATTT ACACCGGGTG GCAATCCTGA TGCAGCAGAG CGGTCCGGCG CGTGAGCGGC TGACGGCGGG GATCTATCTG GGTGGCGGGG ATGAAGGGGA TTCCATGGCT GAGTTAGAGG CGGCCTTTAT CGCCACCGAA CGCAGTGACG AAGCTGAGAA ACGCTTGATC CAGTGGATGA AGTCCCGACG TTGGGATCCC ATCCTCAGCA ACGGCATGCA TGTACCGGAA GGGTATCTGC AAAGCGCCGT GCAGGAGGGG GTGATCTCGG AACTGGAGGC CAAACAGTTG GATGATACCC TAGAGCGCCG TATGCGGGTG GTGCGGGTGG ATGAGTTTCC AGCGGTCTGT TGGTTGGGAG AGGAGGTGGC AGCATGA
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Protein sequence | MWLWLVVIPL LTLFLVISLP MLRRRLLSGP IMALMQGAMP PLSQTEREAL ESGTVWWERE LFSGRPDWSK LQNLPADTLS KEEQAFLEGP VQRLCARLDE WRIKQEEHDL PADLWEMLKQ EGFFGMIIPR EYGGLGFSAR GHSAVITKIA SRSVTAAVTV MVPNSLGPAE LLMRYGTPEQ QRYYLPRLAN GREIPCFALT SPRAGSDAGA IPDTGVVCRG NFRGETVVGI RLNWDKRYIT LAPVATLLGL AFRLYDPDNI MGNIRDLGIT LALIPTQTAG VSIGTRHDPL GVPFLTGPTR GHQVFIPMSY LIGGEQGIGQ GWRMLMACLS EGRGISLPAL SVGAAKLAAR SSGNYSRVRK QFGLAIGRFE GVQEALGRIG LNAYRMESAR TLTVTILDQG ERPSVAAGIV KYHLTEGMRQ TINDAMDIWG GTAICRGPHN LLAHAYQAIP IGITVEGANI LTRTMMIFGQ GAIRAHPYLL QEMEAVTGQQ PVAERVIAFD RLLWAHVGYT MMNGLRALVY GLLGNAGAAA PQGVCATERK CYQRISHWSA AFAFMSDLAL ARLGGSLKRR ESLSALLGDA LSHLYMASAI LHRYSKDGSP PQDRPIMEAA LEDSLLQVRQ ALVEVVRNFP DPVVALLMRL VVFPTGLAQR RLPQHHLHRV AILMQQSGPA RERLTAGIYL GGGDEGDSMA ELEAAFIATE RSDEAEKRLI QWMKSRRWDP ILSNGMHVPE GYLQSAVQEG VISELEAKQL DDTLERRMRV VRVDEFPAVC WLGEEVAA
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