Gene Mmc1_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3513 
Symbol 
ID4481111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4389507 
End bp4390616 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content52% 
IMG OID639724262 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_867404 
Protein GI117926787 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCAT TCGCGGATTT TCCCGTGCTA ATTAGGTCAA AATGGGTATA TTTTTGGGTC 
ATGATCAAAA CAGACTCGCT ACAGATTACC ACGGACATTC TTTCCCTGAT CGCCGAAATC
GACGAATTCA AGGGGGCCTG GCGTGCGCTC GGCACGCTGG CACCGGAACG CCTGTCTGCC
CTGCGGCGCG TGGCCACTAT CGAGAGCATC GGCTCTTCAA CCCGCATCGA GGGCAGCAAA
CTCTCCGACC GCGAGGTAGA GCGCCTGCTG TCAAATCTCC AGATCAAATC ATTCGAAACC
CGTGATGAAC AGGAAGTCGC CGGTTATGCC GAAACCATGG AGCTGGTGTT TCAATCCTGG
GCCGATATCA CGATCACCGA AAACCATATC AAGCAGCTTC ATCGTGACCT GCTGAAATAC
AGCAGCAAAG ACAATCATCA TCGCGGACAG TATAAAACGA CCAGCAACAG CGTTGCAGCC
TTTGATGAGG ACGGCAGGCA GATCGGCATC GTTTTCGAAA CGGCCACGCC TTTTGATACA
CCGCGCCTGA TAGAAGAACT CGTTGCCTTC GTCAATGAAG CCGTAGAAAC CAAACGGCTG
CACCCCCTCC TAATTGTGGG TTTTTTTGTC GTGATCTTCC TTGAAATCCA CCCCTTCCAG
GATGGAAACG GACGATTGAG CCGCATCCTT ACAACGCTGC TTTTGTTGCG AGTTGGCTAC
GCCTATGTGC CGTATAGCTC TCTGGAGAGT GTGATTGAGC AAAGCAAGGA AGGCTATTAC
CTCGCCCTGC GCCAAACTCA AGGTACCATA CGGACAGAAG CACCCAACTG GCAGCCATGG
ATCACGTTTT TCCTGCGGGC CTTGCAGCAA CAGATGAAGC GGCTGGCCAA GAAAGTGGAG
CGGGAAAAAA TTGTTCTTTC CGCTTTACCG GAAATATCCG TGCAAATTCT CGAATATGCG
CGTGAACATG GTCGCGTCAC CATCGGCGAC ATAGCGACGC TAACAGGCGT GAATCGTAAT
ACGCTCAAGA AGCATTTAAG CCAACTTGTT GAAAAGGGTC ATCTTGTCCT GCATGGCAGC
GGACGTGGTG CCTGGTATGC ATTAGCCTGA
 
Protein sequence
MGAFADFPVL IRSKWVYFWV MIKTDSLQIT TDILSLIAEI DEFKGAWRAL GTLAPERLSA 
LRRVATIESI GSSTRIEGSK LSDREVERLL SNLQIKSFET RDEQEVAGYA ETMELVFQSW
ADITITENHI KQLHRDLLKY SSKDNHHRGQ YKTTSNSVAA FDEDGRQIGI VFETATPFDT
PRLIEELVAF VNEAVETKRL HPLLIVGFFV VIFLEIHPFQ DGNGRLSRIL TTLLLLRVGY
AYVPYSSLES VIEQSKEGYY LALRQTQGTI RTEAPNWQPW ITFFLRALQQ QMKRLAKKVE
REKIVLSALP EISVQILEYA REHGRVTIGD IATLTGVNRN TLKKHLSQLV EKGHLVLHGS
GRGAWYALA