| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3483 |
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| Symbol | |
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| ID | 4481955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4350411 |
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| End bp | 4352432 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639724231 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_867374 |
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| Protein GI | 117926757 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATC CCACACTGCA TCATCTCAAC GCCCCCCAGC GGCAAGCCGT TACCACCCTG
GACGGCCCCC TCATGGTCTT GGCCGGGGCA GGATCGGGCA AAACACGGGT ATTGACCCGA
CGTCTGGCCT GGATTATCCA ACAGCAACAG GCCTCCCCTG AAGAGGTGCT GGCGGTGACC
TTTACCAATA AGGCCGCCAA AGAGATGCGG AACCGGGTTC AGGCGTTACT GGGTTTGGAT
GCCCCCGCCC AGGCCCACCG CTTCTGGATT GGTACCTTCC ACGGCATGAG CGCCCGCATG
CTGCGCCAAT ACGCCGACCG CCTTGGCTTT GAGCGGGACT TTACCATTCT TGACAGCAGC
GACCAGGAGC GCCTATTTAA ACGGCTCTGT GAAGAGTTGG GCTTTGCCGA TGCCTACTGG
ACCCCCAAGC GCCTAACCCA CACCATTGGA CGCTGGAAAG ATGATGGCAT TCGCCCCCAG
GATTTAACCG ATCGGGAGAT CCGTAAAGCG TGGGAACGGG CGCGTATTCA ACAGATGTAC
GAACGCTACC AGCAAGCACT GCTGCAAAGC AATGCCATGG ATTTTGGCGA TCTGCTGCTG
CACTGTCTGC AATTGTGGCA ACAGGAACCG GCCATCTTGG CGGCCTTTCA GCAGCGCTTT
CGCTATCTGT TGGTGGATGA GTATCAAGAT ACCAACCATG TTCAATACCG CTGGATCTGC
GCTCTATCAG GGTTGCACCA AAACCTCTGT GTGGTGGGGG ATGATGACCA ATCCATCTAC
AGTTGGCGGG GGGCACGTAT TGAAAACATT CTCAAGTTTG AAGAGGATTT CCCTCAAACC
AAGATTATTC GTTTGGAACA AAACTATCGC TCCAGTGGCA ATATCCTTAA AGCCGCCAGC
GGCCTGATCA ACCACAACAA GGGCCGCATG GAAAAACAGC TCTGGACCGA AGATGCCCAA
GGCGATGCCA TTCACTTCTA CCAAGCGGAG AATGATGAGG ATGAGGCACG CTTTGTGGCC
TCGGAAATTC TCACCCTCTG CCCCGCTGGG GATTATCAAC AGGCGGCTAT TCTGGTGCGA
ACCGCTCGCC AGACCCGCTC CCTGGAAGAG GGTTTGATGC GGGCGGGTAT TCCTTATCAG
GTGGTGGGGG GGCTGCGCTT TTTGGATCGC GCCGAGGTGC GCGATGCCTT GGCCTATCTG
CGGGTGGTGG CCTCTAACCG GGATGATGTG GCCTTTGAGC GGGTTATCAA TCTCCCCAAG
CGTGGCATTG GCCCAGGTGC CCTGCAATCC CTGCGGGAGA TTGCCAGCCA GGAGCGCTGC
TCTTTGCTGC ATGCGGCCCG CTTTGCGGTC GAGAGCAACA CCATGAAGGG GGCTGCGGCC
AAGGGTTTGG CAGCTTTTAT TCAGCTCATT GAGCACGCTC GCAGCATGCT CGCCGACGAT
ATAACCCCCG CTGAGATGCT CACCAAACTG TTGGCCCTAA GTGGCTACCG GGATTATGTA
CGGGATCTGG AAAAGGGCAA CGACCGTATC GACAACCTGG ACGAACTGCG TAATGCCCTG
GCCCGCACTG AGAGTTTGCA ACTATTTTTG GAAGAGGTTG CCCTTGCCAC CGACCTCCAG
GATGGCGGAC CAGTTGCCAA TCGGGTGGTG ATCTCCACCC TGCATGCCGC CAAGGGGTTG
GAGTTTCCCT GGGTGTTTCT GGTGGGGGTC GAAGAGGATG TTATGCCCCA TAAACTGGCC
CTCACCGAAC AGCCGGAGAT CGGCTTAGAG GAGGAGCGGC GCTTGGCCTA CGTTGGCATG
ACCCGCGCCA AACAGCGGCT TTATCTCACC ATGGCGCGTC GTCGATGGCT CTTTAATAAA
CCGGTTATGC CAATTAAGTC CCGTTTTTTA AAGGAGCTTC CTCAAGAAAT TTTAGAGGAT
CGTGGTTTTC GTGTGAGCAG CCGACGCGGT GCCACAGGCA GCTTGGCGGG CCTGCCCGGT
GGATCATTGC ACCACCAGAA GGTGCGCTTT CCGTTACGTT AA
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| Protein sequence | MDHPTLHHLN APQRQAVTTL DGPLMVLAGA GSGKTRVLTR RLAWIIQQQQ ASPEEVLAVT
FTNKAAKEMR NRVQALLGLD APAQAHRFWI GTFHGMSARM LRQYADRLGF ERDFTILDSS
DQERLFKRLC EELGFADAYW TPKRLTHTIG RWKDDGIRPQ DLTDREIRKA WERARIQQMY
ERYQQALLQS NAMDFGDLLL HCLQLWQQEP AILAAFQQRF RYLLVDEYQD TNHVQYRWIC
ALSGLHQNLC VVGDDDQSIY SWRGARIENI LKFEEDFPQT KIIRLEQNYR SSGNILKAAS
GLINHNKGRM EKQLWTEDAQ GDAIHFYQAE NDEDEARFVA SEILTLCPAG DYQQAAILVR
TARQTRSLEE GLMRAGIPYQ VVGGLRFLDR AEVRDALAYL RVVASNRDDV AFERVINLPK
RGIGPGALQS LREIASQERC SLLHAARFAV ESNTMKGAAA KGLAAFIQLI EHARSMLADD
ITPAEMLTKL LALSGYRDYV RDLEKGNDRI DNLDELRNAL ARTESLQLFL EEVALATDLQ
DGGPVANRVV ISTLHAAKGL EFPWVFLVGV EEDVMPHKLA LTEQPEIGLE EERRLAYVGM
TRAKQRLYLT MARRRWLFNK PVMPIKSRFL KELPQEILED RGFRVSSRRG ATGSLAGLPG
GSLHHQKVRF PLR
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