Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3482 |
Symbol | |
ID | 4481954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4348560 |
End bp | 4350308 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639724230 |
Product | Cl- channel, voltage-gated family protein |
Protein accession | YP_867373 |
Protein GI | 117926756 |
COG category | [K] Transcription [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTACTT ATTTAAACCG CCTTGGGGTT AACGAACATA TTATCCTCTC TGCCATCGCC ATTATCATCG GCGTCATGGT GGGTTATGGG GCCATTTTGT TTCGTACATT GATCGAGGGA TTTCAACACC TTTTCTTCGG CAGTAGCGCC GAAGATATGG TACAGGTCAT CTCTGGTCTA CAGTGGTGGC ATGTGATCCT GGCCCCCATG CTGGGTGGGG CTATTGTGGG CCCGTTGGTT CACTTTGTTT TCCCTGGCTC CCGGGGTCAT GGTGTGCCCG AGGTGATGGC GGCGGTGGCC TTGCACGGTG CCAAAATGAA CCTGAAGGAT GGCATCGGCA AAATGTTTGC CTGCTCCATC TCCATCGGCT CCGGTGGCTC CGTAGGCCGG GAGGGTCCCG TGGTGCATCT GGGCGCAACC CTCGCCTCTT GGTTTGGTAA GCAGCTCAAC ATGTCCACCA AACATATGCG TACCATGGTG GGATGTGGCG CGGCGGCGGG CATTGCGGCC TCCTTTAATG CCCCTATCGC CGGGGTTATG TTTGCCCTGG AGGTGATCTT GGCCGATTAT GCCCTTGCCA CCTTCTCCCC CATCGTGCTC TCATCGGTGA TCGCCACCGT CATTGCCCGT CTGCACTTGG GCGATTTCCC CGCTTTTATC GTACCCCACT ACACCCTGGT TTCTGCCTGG GAGATCCCCG CCTACGTGGG GTTGGGGCTG GTATGCGGCT TGACCGGCAT TCTGTTTATG CACACCCTGT TTAAAGCCGA GGATGTCATC GGCAAAATCG CCGTTCCCCG CTGGATCAAA CCCATGTTTG GCGGCATGCT GTTGGGACTT ATTGCCCTCC AGTTTCCGCA GATCATGGGC GTTGGCTACG ACACCATGAA CAAAGCCTTG TTGGAACAGA TGATCGGCCC AACCATGTTG ATGCTGGTGT TCGTCAAAAT TCTCGCTACC TCCCTGACCC TGGGTAGCGG CTTCTCGGGG GGGGTGTTCA CCCCCAGTCT GTTTTTGGGC GCGATGGTGG GAGGGGCTTT TGGCACCTAT GCCCACGCCC TCTTTCCAGC CATCTCCGCC GGTCCAGGTG CCTACACCCT GGTGGGCATG GGTGCCATGG CCGCCGCCGT CTTGGGCGCA CCCATCGCCT CTATTTTGAT CCTGTTTGAA CTGACCGGTG ACTACCGTAT CATGCTGGCA TTAATGGTGG CCTCCATCGT GGCTACCCTG CTTATTAACC AAGTCTATCG CGATTCGGTC TACACCAAAG CCTTACGTAC TAAAAATATT GATCTCTGGT CCGGACGAGA ATCGGGACTG CTGCGCCATA TTCCCGTGAG CGCCATCATG AAACGCACCT TCGAAATGAT CCCCGACAGC ATGAATATTC GCGATCTTAA AGAGAAAATA CATCGCACGC AGGAGGAGAA TTTTCTGGTG GTCAATGAGC AAGGCGATCT AAAAGGTATT GTCTCCTTTC AGGATATCCG TGGGGTGGCC TTTGAGCAGG GGTTAGAGGA TTTGGTGCTG GTGCGCGATA TTGCCACCCG TGAATTGATC ACCGTTACCC CCAGCGATAA CCTTTATGAT GCCTTCCGCC GCATGGGGTC GGGCAATGTG GAACAGTTAC CTGTGGTGAG TGAGGATAAC CGCTCGCAGG TGCTGGGCAT TATCACCAAC CATGATGTCA TCCAAGCCTA CAACCAAGCC CTGCTGGAGC GTGAAGCCGA ACGGGAACTC AACCGCTAA
|
Protein sequence | MLTYLNRLGV NEHIILSAIA IIIGVMVGYG AILFRTLIEG FQHLFFGSSA EDMVQVISGL QWWHVILAPM LGGAIVGPLV HFVFPGSRGH GVPEVMAAVA LHGAKMNLKD GIGKMFACSI SIGSGGSVGR EGPVVHLGAT LASWFGKQLN MSTKHMRTMV GCGAAAGIAA SFNAPIAGVM FALEVILADY ALATFSPIVL SSVIATVIAR LHLGDFPAFI VPHYTLVSAW EIPAYVGLGL VCGLTGILFM HTLFKAEDVI GKIAVPRWIK PMFGGMLLGL IALQFPQIMG VGYDTMNKAL LEQMIGPTML MLVFVKILAT SLTLGSGFSG GVFTPSLFLG AMVGGAFGTY AHALFPAISA GPGAYTLVGM GAMAAAVLGA PIASILILFE LTGDYRIMLA LMVASIVATL LINQVYRDSV YTKALRTKNI DLWSGRESGL LRHIPVSAIM KRTFEMIPDS MNIRDLKEKI HRTQEENFLV VNEQGDLKGI VSFQDIRGVA FEQGLEDLVL VRDIATRELI TVTPSDNLYD AFRRMGSGNV EQLPVVSEDN RSQVLGIITN HDVIQAYNQA LLEREAEREL NR
|
| |