| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3403 |
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| Symbol | |
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| ID | 4484089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4244795 |
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| End bp | 4247668 |
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| Gene Length | 2874 bp |
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| Protein Length | 957 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724151 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_867295 |
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| Protein GI | 117926678 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCATA TCAATGTCCA TACAAATCTC CGTAACTCCA GGCCGTTGAT TTTATTCGCT
GGGGCATTGT TGCTGTTGTT GCTGACCCAG TTGTGGGTCA TTACCGGAAA ATATCAACAG
GATATGCGTG AGGATCTGCA TGGTAGCATC AAAGCCCAGC TTGCCTTGCT CGGTGCTACG
TTGCAGGAAG CCGCCATCCG TGGTGACCTT GCTCAGATCA AGCGCAACCT TGAAATGTGG
GGGCAGGCTC ACTCAGAAAT TTTGGCCATA CGGGCGATCT CTCCCAACGG GTTTGAGTTG
GTTCATTATC AAGCGGGCGC GTTGCAGGGT GATATGTATG TCCATAAAAG CGCAATAACC
GTAGATGGGC GTCAGCTCAT AACCCTGGAA GTTACCCATA ATTTAAGCAT GATCAATGAC
CGACTGCGTA CCATGACCCT CTACATGGGG GTGGTCTCCA GTCTGATATC GGGACTATTT
GCCCTAACGG TTTGGTGGAT TATGACCCGT TTTGCCATCG CGCCGCTCAA CCAAGAGTTG
GCAGCACGGC AGCGCGCGGA AAATATGATA CGCGAGAGTC AACAGGCGCT GGTCAAAGCA
CAATTGGTAG CCCATATGGG GAGCTGGAGT AGCGATGTCG CCATTGAACA TATGGAGTGG
TCCCAGGGGC TCTGCCAGCT GTTGGGGGTG AAGGTTGATG AGGCACCTCT ACCGGTGGAG
CGCCTGTTGG GGTTGGTTCC ACAGCCCCAG CAACAGTCTG TGTTAGAGAT GTTGGATCGT
CTCAGTCAAC AGCAGCAAAA TCAAGTCCAG ATGGAGCACC GCATTCATCG CGAAACCGGT
GGGGTGTTGC AGGTGCTGCA CCGCTGTGAA CGGGTGGAAG GGGCCAATGG CCCACGGGTG
CAGGGCATTT TAATTGATAC CAGTCAGAGC GAGGCACTGC GTGGGGCTTT GGCGGCCAGT
GAAGAGAAAT TTCGTAACCT GTTCGACAAT ATGGGCAGCG GGGTGGCCAT TTATGAAGCC
ATAGATAATG GCGATGATTT TATTATTCGT GGCTTTAATA AGGCGAGCAC GGTTTTTACC
AAACTCGACC GCGAGAGTAT ATTGGGAAAG CGGGTCACGG AGATTTTTCC GGGCATCCGG
GCGATGGGGC TGCTGGATCT TTTTAAGCGG GTATGGCACA GCGGCGTGCC GGAACATTTA
CCATTAACCC AATATAGCGA CCAACGCATT ACACAGTGGG TGGAAAACTA TGTCTACCGT
TTAGAAAATG GTGAGGTGGT CGCGGTATTT GATGACGTTA CTTCCAACCG ACAGGCCCAG
CAGGAGCTGG CCCAGAGTGA GCTGCGTTTT CGCGAGATGG CCGAGACCTT GGAGGATGTC
TTCTGGATCA CCAGTGCCCA TGGGCACCGC ATACTCTATG TCAATCCAGC GTTTGAAAAG
GTGTGGGGCT ATTCGGTACA GGCGCTGGAG CAAGATATTA ACCTCTGGTC GCAGTCGATC
CACCCGGAGG ATCGTGCGCG GGTCGAAGAG GCGCTCCTCC AAAGCACAAG CCATGCGGAT
GGTTTTGATC AGGAGTACCG TATTGTGCGG GGGGATGATG GCCAATTGCG CTGGATACAT
AACCGAGGTT ATCCCATTGA GGAGCAGGGG CAGGTAGTCA GAGTAGTTGG GTTAGCCACG
GATATTACAG CTAAAAAAGA GAATGAAGCA GCGCTACAGC AGGCGATGCG ACAGGCGCAG
CAGGCCAGTC AAGCCAAGAG TGAGTTTTTA GCGGCCATGT CCCATGAGAT CCGTACCCCA
ATGAACACGG TTATTGGTAT GACCGAGCTG CTGCTGGAGA CCCCTTTGAG TGAAGAGCAG
CAGCGTTATG TGCGGAGTTT GCGCAGCTCG GGTACAGCGT TGTTGGACGT GATTAACGCC
ATTTTGGATC TTACCCGTAT TGAGTCGGGC CGTCTGGAAC TGACCGAAGA GCGTTATGAT
CTCCATGAAT TAATGCGTGA AACCTGTGAA GTTATGGGCT ATGCCGCGGC CAAAAAGAAG
CTGGAGATGG TCTTGGAGAT GAATCCCAAT ACCCCCAACT ATTTGGTGGG GGATGCGCCG
CGTTTGCGTC AGATCCTGAT CAATTTGGTG GGAAATGCCA TAAAATTTAC CGAAGTGGGA
CAGGTTTGTG TGCGTGTTTG GTTAGATGAA GCGGTAGAGC GCTTACGCAT TGAGGTCGAG
GATAGTGGAA TTGGTATTCC CAAGGAGCAC ATAAACACCA TTTTTGATAT GTTTGCCCAA
GCAGATTCCA GTATGGCCCG TCGTTTTGGT GGCAGTGGGC TGGGTTTGAC CATCTCTCAG
CGTTTGGCTC AGCTTATGGG GGGGCGTCTC GCGGTGCAGA GTCAGGTACA AAAGGGCAGT
TGCTTTACCT TGTCCATGCC TTGCCAAATT GGTGAAGAAC CTGCACAAGA GGTGGTAACA
GAAACGCAGA GTTTAACCCG TCAGACTTTA CGCATTTTGC TGGCGGAGGA CTCTGTGGAT
AACCAAAATT TAATTCAGGC CTATCTCTCC CGTACATCCC ACGAACTGAT CTATGCCATC
AATGGAGAAG AGGCTGAGCG CTACGTTAAA TCCGGGCAGC CAGTGGACCT GATCTTGATG
GATATACAGA TGCCCTTGGT GGATGGCTAT ACCGCCACCC GTCGCATTCG AGCATGGGAA
CAGCAGCAGG GGCGGCCTGC GGTACCGATT GTGGCTTTAA CCGCCCATGC TTTGAAAGAG
GATGAAATGC GCAGTTTAGA AGCGGGTTGT GACGCACACT TGACCAAGCC CATCGGTAAA
AAGCAGCTAT TGCAGGTATT GGCACACTAT CCACGTCGGG AGAGCACCCC GTAA
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| Protein sequence | MAHINVHTNL RNSRPLILFA GALLLLLLTQ LWVITGKYQQ DMREDLHGSI KAQLALLGAT
LQEAAIRGDL AQIKRNLEMW GQAHSEILAI RAISPNGFEL VHYQAGALQG DMYVHKSAIT
VDGRQLITLE VTHNLSMIND RLRTMTLYMG VVSSLISGLF ALTVWWIMTR FAIAPLNQEL
AARQRAENMI RESQQALVKA QLVAHMGSWS SDVAIEHMEW SQGLCQLLGV KVDEAPLPVE
RLLGLVPQPQ QQSVLEMLDR LSQQQQNQVQ MEHRIHRETG GVLQVLHRCE RVEGANGPRV
QGILIDTSQS EALRGALAAS EEKFRNLFDN MGSGVAIYEA IDNGDDFIIR GFNKASTVFT
KLDRESILGK RVTEIFPGIR AMGLLDLFKR VWHSGVPEHL PLTQYSDQRI TQWVENYVYR
LENGEVVAVF DDVTSNRQAQ QELAQSELRF REMAETLEDV FWITSAHGHR ILYVNPAFEK
VWGYSVQALE QDINLWSQSI HPEDRARVEE ALLQSTSHAD GFDQEYRIVR GDDGQLRWIH
NRGYPIEEQG QVVRVVGLAT DITAKKENEA ALQQAMRQAQ QASQAKSEFL AAMSHEIRTP
MNTVIGMTEL LLETPLSEEQ QRYVRSLRSS GTALLDVINA ILDLTRIESG RLELTEERYD
LHELMRETCE VMGYAAAKKK LEMVLEMNPN TPNYLVGDAP RLRQILINLV GNAIKFTEVG
QVCVRVWLDE AVERLRIEVE DSGIGIPKEH INTIFDMFAQ ADSSMARRFG GSGLGLTISQ
RLAQLMGGRL AVQSQVQKGS CFTLSMPCQI GEEPAQEVVT ETQSLTRQTL RILLAEDSVD
NQNLIQAYLS RTSHELIYAI NGEEAERYVK SGQPVDLILM DIQMPLVDGY TATRRIRAWE
QQQGRPAVPI VALTAHALKE DEMRSLEAGC DAHLTKPIGK KQLLQVLAHY PRRESTP
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