| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3402 |
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| Symbol | |
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| ID | 4484088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4241899 |
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| End bp | 4244523 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724150 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_867294 |
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| Protein GI | 117926677 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCCT TTCGACTAAA AACCGTGCTG GGTATAGCGC TTATTCAAGC TTTTGTATTG
CTTACATTGG TCAGTTCAGC CTTGGACGAT CTGCGGCAAT CACACCAAAA TAATCTGTTG
GCCCATGCGA AAACCCTTAC CACGCTTATG GACACCGCGA CCAAAGCACC CATTTTAGAA
AAAAACCACA GCGCATTACA GGCGATTGCT CATGAGATTG TGCAGAAAAA TGCTATAACC
TATCTAAGCA TTTACGACAA CCAACAGCAG ATCCTCTATC AATTTGGTCC AGCACCCACC
CCCCATATCA AGCCAGACAT AAATTTACGG GATATAGACG ACGCCACCTT TGATCTGCGC
CACCCGATGC TGCATGAGCA GAGTGTCTAT GCAACCTTGG CATTAGGGCT GCCCGTGACA
CCGATTATAA AGGCGCTGCA CGCTGCACAG AACCAGCAAC TACGTTTGGC ACTGTTGGCG
ATGAGTGCCT CAATACTGGT TTCCTGGTTG CTGGGCAGTT ACCTTACCCG TCAGTTGGTG
CATTTGCGGG AGGCGGCTAC AGCCATAGGC CATGGACATT TTAACCATCG CATACCCGTG
CAGGGGCAGG ATGAGTTGGC GTTGACCGCC ACCGCCTTTA ACCGTATGTC GGGGGAGTTG
GATAAAACCT ATCAGCGTTT AAAAAAATCA CTCTATACCA GCAACCGCAT GGCCAAATTA
GAGGCCACCA TTATGCACAC GGTGATGGAT GGTTTGATCA CCATGGACAG CAGCGGCAAA
GTTTTGAGTT TCAACCACGC GGCGGAGGGG ATTTTTGGTT ATGCGGCGGC GGAGGTGGTG
GGGGAGCAGA TCACCATGCT CATGCCCGAA CCCTACCGTA GCCAACATGA TGATTATGTG
CAGCGCTATC TGCAAGGGGC GGCGCCCCGG GTGATCGGTT CAGCGGGACG GCATGTCACC
GCGCAGCGCA AAGATGGTGC CCTATTACCC ATCCGCTTGT CGGTCAATGA GATGGTATTC
GAGGGGGAGC GGCTGTTTGT GGGATTGGTG GCAGATGTCA GTGAGCGGTT GCAAGAGGAG
CGCGCTTTGA TTGAGGCCAA GGAGCAGGCC GAGGCGGCCA ATATGGCCAA GTCGCGTTTT
TTGGCGGTGA TGAGTCATGA GGTGCGCACC CCGATGAATG GTATTTTGGG TATGCTTGGT
TTGCTCAATG ATCGCCGCTT GGATGGTCAG CAGCAGGAGT GGCTTGCCAC CGCGCAGGAG
TCTGCCGAAT CCATGCTTAC CCTGTTAAAC GATATTTTGG ATTTTAGCAA AATTGAGGCG
GGGCATCTGG AACTGGAGCA GAGCGCTTTT AGTCCAGAAC AGATCTTAAA GGGGGTGCAT
GATCTGTTTT TACCCCGTGC TACGGCCAAG GGCATCACGC TGGAACTGGA GCAGGGGGCT
AACCTTCCGG CGTGGGTGCA GGGGGATCCT GGGCGTCTGC GCCAGGTGTT GATGAATTTG
GTGAGTAATG GCATTAAATT TACCCACCAG GGGGGGGTCA CGATGCGGGT GGCGCAACAG
GCGAAGAGAG AGGATTCTCT ACTGTTGCAG TTTGAGGTGC AAGATAGTGG TATTGGCATT
CCTCCGCAAC AGTTGACCCA ACTGTTTCAG CCCTTTAATC AGTTAGACCC GTCTTATTCC
CGCAAATATG GGGGCAGTGG TTTGGGGTTG GCGATCTGTC GTCATTTGGT GGATCTGATG
GGGGGGGAGA TTCGCTTGGA GAGTCCACCA AGTGGGGGTA GTCGTTTTAC CTTTACCGCC
CGTTTTGGCT ATGCGCATGC GCCCCAAGAT GAGGTGTTGG ACAATTCCGA GCAGGAGGTA
CAACTGCATG GGGTGCGGGT ACTCCTGGCC GAGGACAGCC CCACCAATCA GATGGTGGCG
GTGGCGATGT TGGCCCGGGT GGGGTGCCAC GTGGATGTGG CGGTCAATGG TTTGGAGGTG
CTGGAAGCGT TGACCCGTGC GCCTTATGAT CTGATTCTTA TGGATTTAGC CATGCCAGAG
ATGGATGGCT GGCAGGCCAT TGCACGTATC CGTGGCATGA ATGCCCCGCT GCGGGATATT
CCCATCATTG CGCTTACCGC CAATGCCTAT CCAGAGGTAC GCGCGCAATG TCTGGCGGCG
GGGGCGCAGG ACTTTATTAC CAAGCCGATC CAGCGCAACA TTTTGCTCAA TGGTATCTTG
GCATTGGTGA CGCAGGCTCA GCAGACAGGC CAGCAAGGGG TGGGGGCTAA GCGGTGTCAT
TCCAACGCCC CGATCCGCGA TGAGAAGGTG CTGGAGCGTT TGGCCGAAGA TACCCACTGT
TCGTTGTTAC CCCGTATTCT GGAGGTATTT ATTGATGAGG CCGATGCCCG TTTGCAGGCG
ATCTCTACGG CGTTGGATAA TGAGGCTTGG CAGACCGTAG CGCTGGAGGT CCACCCCTTA
AAGAGCAGTG CAGCCACCTT TGGAGCAGCC CGATTGGCTG CCTGTGCCAT GCAGTTGGAT
GCTGCTTGCA AAGCGCAGCA GTGGACGCAA ATGCACGATT TATGTAACTG TTTGATCGAG
GTTTATAGGG AGACGAGGGG TCTTTATAAG GGGCAGCAGG TTTAG
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| Protein sequence | MMSFRLKTVL GIALIQAFVL LTLVSSALDD LRQSHQNNLL AHAKTLTTLM DTATKAPILE
KNHSALQAIA HEIVQKNAIT YLSIYDNQQQ ILYQFGPAPT PHIKPDINLR DIDDATFDLR
HPMLHEQSVY ATLALGLPVT PIIKALHAAQ NQQLRLALLA MSASILVSWL LGSYLTRQLV
HLREAATAIG HGHFNHRIPV QGQDELALTA TAFNRMSGEL DKTYQRLKKS LYTSNRMAKL
EATIMHTVMD GLITMDSSGK VLSFNHAAEG IFGYAAAEVV GEQITMLMPE PYRSQHDDYV
QRYLQGAAPR VIGSAGRHVT AQRKDGALLP IRLSVNEMVF EGERLFVGLV ADVSERLQEE
RALIEAKEQA EAANMAKSRF LAVMSHEVRT PMNGILGMLG LLNDRRLDGQ QQEWLATAQE
SAESMLTLLN DILDFSKIEA GHLELEQSAF SPEQILKGVH DLFLPRATAK GITLELEQGA
NLPAWVQGDP GRLRQVLMNL VSNGIKFTHQ GGVTMRVAQQ AKREDSLLLQ FEVQDSGIGI
PPQQLTQLFQ PFNQLDPSYS RKYGGSGLGL AICRHLVDLM GGEIRLESPP SGGSRFTFTA
RFGYAHAPQD EVLDNSEQEV QLHGVRVLLA EDSPTNQMVA VAMLARVGCH VDVAVNGLEV
LEALTRAPYD LILMDLAMPE MDGWQAIARI RGMNAPLRDI PIIALTANAY PEVRAQCLAA
GAQDFITKPI QRNILLNGIL ALVTQAQQTG QQGVGAKRCH SNAPIRDEKV LERLAEDTHC
SLLPRILEVF IDEADARLQA ISTALDNEAW QTVALEVHPL KSSAATFGAA RLAACAMQLD
AACKAQQWTQ MHDLCNCLIE VYRETRGLYK GQQV
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