| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3395 |
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| Symbol | |
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| ID | 4484081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 4232385 |
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| End bp | 4234889 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724143 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_867287 |
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| Protein GI | 117926670 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC ATAATAAATC AGAGCTGCGC AAACGTGCTG AAGAGTTGAT GCTGCGTCAG
GAGCAGATTC ACACCAAATG GGATAGGGAT AATGTGAATG CCCTTATCCA TGACCTAAAC
GTACACCAAA TTGAGTTGGA GATTCAAAAT CAGGAGCTGC GGGAATCTCA ATTGCGCTTG
GAAAAGGCCA AACAGGTGCA GGAGAGTGCC CTAGCCCGCT TTGAGGCACT TTTTAACAGT
GCGCCTGAAG GGTTTATTTT GATTGATGTC TCGGGCATGG TCCTAGAGTG CAACCATACC
ACCCTGGAGA TGTTGGGCTG CAAGCGGGAA GATCTGATCC GCAAGCCCTT TTCTGCCTTT
GTGCATATTG AAGACCAGCC TAAATTTTAT GCTTCTTACC CCTCGTTTTT TAAAAGTACC
TATCCAAAGC CCATTGAGAT ACGGCTCATC CATAAGGGGA GCGCATTTAA ACATAAAGAT
CACTCTTTTA TTGCGGAGTT GACCGGGTGC AGCACCCTGA AACAGGATCT ATTCAAAGAT
CTTTATCATG ATAATCCATT TATCTTAGTC TCCATCTACA ACATTAACGC CCACAAACTG
CTTGAAAGAG AGCTGGCGGA TGCCAAACAA GCGGCTGAAT TGGCGAACCA TGCGCTTTTA
GAGAGTCATG ACAAACTCGA AGCCACGGTT GCCCAACGTA CCGCCGCCCT CAAAACCAGC
AATGAGCAGT TGAAGCAGCA AATGATTGAA CGGGAACAGG CCCAGCACCG CCTACGCTTG
ACCGCCGGGG TATTTGAAAA CACCAGCGAA GCGATCATTA TTACCGATGC CGCTAACCGG
GTTATGGAGG TCAACCCCGC TTTTGTGCGT ATTACAGGCT ACCCAGCCGA TGAGGTGATT
GGCCGAGATC CTGGTTTCAT GAAATCGCAC CGCCATACTC ACGAATTTTA TGCTGAAATG
TGGAAGAAGA TCTGGCAAAC GGGTCAGTGG CAAGGGGAGA TATGGGACCG TCGCCACAAT
GGCGAGATCT ACCCAAAATG GTTAACCATC AACGCCGTGT ATGATGAACG TGGCCATTTG
GTCAACTGTA TTGGCATTTT TTCGGATATT TCACGGTTAA AAGCAACCGA GGAGCGGTTG
GAACAGTTGG CCTTTTTTGA CTGTTTGACC AAACTGCCCA ACCGTGCGCA CTTTCAATCG
CGCCTGGACC ACGCTTTAAC CGCCGCCAAC CGTCGCCAAA ATAAAGTTGG ATTGATTTTT
ATTGATTTGG ACCATTTTAA ACACATCAAT GACTCCATGG GCCACAATGC CGGGGACCAA
CTGTTGATCG AAGCGGCCAA GCGTATACAA AGTTGTGTGC GTGAAGAGGA TACGGTGGCC
CGCATGGGGG GGGATGAGTT CACCATTATT CTGGCCGACC TGACAGATAC CGCTAAAGTG
ATGACCAATG TGGCTTTGAC TATTCTGGAA TCCTTCACAC ACCCCATTGT GCTAGAAGAT
AAAAAGCTTT TTATAGGGTG CAGTTTGGGT ATGGCCATCT ACCCTGACGA TAGCGGCAAC
GCTGCTCTGC TGATTAAACA TGCCGACACG GCCATGTACC GCGCGAAGGA GTCTGGCCGC
AACCGCTACT CCTTTTACAC AGCCGAGATG AATGCCCAAG CGCAAAGCCG TATCTCCCTA
GAGTCCGAAC TACGCTATGC CATTGACCAT AAAGCGTTTG AACTTTACTA TCAACCCAAG
GTGGATGCCC ATAGCTCTGA GATTGTCGGG TTTGAAGCCC TTTTGCGCTG GATACACCCA
ACCGAGGGTG TGATTTCACC CAACCAATTT ATTCCCATTG CCGAAGAGTC TGGATTGATT
GCCGCCATTG GCAATCAGGT CGTGGAGATG GCCTGCCAAG GCTTGCAGCG GATCAACCGC
TGCACCCCTA AACCCTTACC GGTAGCCATT AACCTTTCGG TTCGGCAACT GCGGCAAGAT
AATCTGGTTA ACTATTTTTC TCAGACTTTG GCAAACTATG GTATCGAGGC CGAACAGCTT
GAGTTAGAGG TTACCGAGAG TTTTTTAGCC AAACCCATTG AAAAGAGCGC GGCGTTGTTG
CAAGCCCTTC ACCAACTTGG CTACAAAATC GCCATTGATG ACTTTGGCAC TGGTTACTCT
TCCTTGAGCT ACCTGAAAAA TTTTCCGATC CACACCCTGA AAATTGATCG CTCCTTTGTC
ATGGAAGTTG CGCACAATCA GGAGAGCCGC ACCATCGTGC AAGCCATTAT CTCAATGGCC
CATGCGCTGG GTTACGACCT GGTGGCCGAG GGGGTGGAGA CAGCCGCACA AGTTAATGTT
CTGCAAGGGC TGGGATGTGG GATTATGCAG GGCTTTCACT ATGCGCGCCC CGCACCATTA
CATGAAATAT TAGAGATTCT TAGCCTAGGG AGCACGCTGG CAATCCAAGC AGCGTCATCC
CTGAAAAACC CAAAAAACAC CCCCAACGAG TTTGTATCAG AATGA
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| Protein sequence | MDDHNKSELR KRAEELMLRQ EQIHTKWDRD NVNALIHDLN VHQIELEIQN QELRESQLRL
EKAKQVQESA LARFEALFNS APEGFILIDV SGMVLECNHT TLEMLGCKRE DLIRKPFSAF
VHIEDQPKFY ASYPSFFKST YPKPIEIRLI HKGSAFKHKD HSFIAELTGC STLKQDLFKD
LYHDNPFILV SIYNINAHKL LERELADAKQ AAELANHALL ESHDKLEATV AQRTAALKTS
NEQLKQQMIE REQAQHRLRL TAGVFENTSE AIIITDAANR VMEVNPAFVR ITGYPADEVI
GRDPGFMKSH RHTHEFYAEM WKKIWQTGQW QGEIWDRRHN GEIYPKWLTI NAVYDERGHL
VNCIGIFSDI SRLKATEERL EQLAFFDCLT KLPNRAHFQS RLDHALTAAN RRQNKVGLIF
IDLDHFKHIN DSMGHNAGDQ LLIEAAKRIQ SCVREEDTVA RMGGDEFTII LADLTDTAKV
MTNVALTILE SFTHPIVLED KKLFIGCSLG MAIYPDDSGN AALLIKHADT AMYRAKESGR
NRYSFYTAEM NAQAQSRISL ESELRYAIDH KAFELYYQPK VDAHSSEIVG FEALLRWIHP
TEGVISPNQF IPIAEESGLI AAIGNQVVEM ACQGLQRINR CTPKPLPVAI NLSVRQLRQD
NLVNYFSQTL ANYGIEAEQL ELEVTESFLA KPIEKSAALL QALHQLGYKI AIDDFGTGYS
SLSYLKNFPI HTLKIDRSFV MEVAHNQESR TIVQAIISMA HALGYDLVAE GVETAAQVNV
LQGLGCGIMQ GFHYARPAPL HEILEILSLG STLAIQAASS LKNPKNTPNE FVSE
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