Gene Mmc1_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3390 
Symbol 
ID4484076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4225221 
End bp4227074 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content52% 
IMG OID639724138 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_867282 
Protein GI117926665 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins
[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGACC TTTTTTTGAC CCATGAGGCG CAAGGATCAT GGTCTTGCCA CCCCCTTTTG 
ATGCTTGAAG AGAGAAGAGA CATGTCCTCG AACGAAACAA CGCCACCCCG CACCAAGCTC
ATGGATCCAG TGATCGCCAA CCCCCCCACA CACTATATTG GTATAGGGGC CTCGGCAGGC
GGCTTGGAGG CGATTCAGGC ATTTTTCTCT CACATGCCTG CCAACAGCGG GGCCGCCTTT
ATTGTGGTGC AACACCTCTC CCCCGACTAT AAAAGTCTCA TGGTGGAGCT GCTCTCCAAG
CAGACCAATA TGGAGGTCAC GCGCATCACC GACGGTATGC CGGTCGAAGC CAACACGGTC
TATCTGATTC CCCCTAAGAA GAATGTTAAA ATCTTCCACG GACGTCTGAT TTTAACCGAC
CAAACCCATA ATAATATTGG CATCAATCTG CCCATTGATA TTTTCTTTGT CTCCCTTGCA
GAGGATCAGG GGCGTAAGGC GGTGGGTATT ATTCTGTCGG GTGCGGGCAG CGATGGCACA
CGGGGGGTCA AGAGCATCAA AGAAAAGGGC GGCATGGTCA TGGTGCAGGA GGAGGCCACC
GCCAAGTTTG ACAGCATGCC CAAAAGCGCC ATAGCCACCA ACCTGCCCGA TTTTATTCTG
CCCCCCGACG AAATGCCCAG CCAACTGCTG GCTTTTGTCA AACACCCCTA TGCGACCCGC
GAGTTAATGA CCGATAAACT GGCGGAAAAA GGCACGGGCT TAACCCGTAT TTTTGCCCTG
CTGCGGGAAA ACAGCAGCAT TGATTTTACC TTTTACAAGC CCTCCACCGT GATGCGCCGT
ATCGAGCGCC GCATGACCAT CAATCAGTAC GAAGACCTGG ATGACTATGT ACACTTTTTA
GAAGCCAATC CACGGGAACA GACGGTGCTG TTCCGTGAGC TGTTAATTGG CGTCACCAGC
TTTTTCCGCG ATGCCGACGC TTACCAGATT CTACAAGAGA GCATTATCCC AGAGTTGGTA
AAAAATAATA CAGGCAAACA GATCCGGGTG TGGGCCTCGG CCTGCTCCTC GGGGGAGGAG
GCCTACTCCC TAGCCATTTT GTTTATGGAG GCCATGCAAA AGAGTGAGGC TGCGGTTGAT
ATAAAAATTT TCGCCACCGA TGTGGATCAG GATGCCATTT TTCGCGCCAG CCAAGGGGCC
TACCCCGAGA GCATTGTGGC CGATGTGCCC GCCCCATTAT TAAATAAATA CTTTATGCAC
AAAGGGGATA ACTACCATAT TATTCGCCAG GTGCGCGAGA TGGTGGTGTT TGCCCAGCAC
AATATTATTA AAGATCCCCC CTTTACCAAC ATCAACTTTG TTTCTTGCCG CAATATGTTG
ATCTATTTCC AGCCCGTGCT GCAACAAAAG GTGCTGGAGG GCTTTAACTT CTCCCTGGCC
ACAGACGGTA TTCTCTTCTT GGGCAGTAGC GAGACCCCGG GTGAAATGGA CAGTTTTTTC
AACACTCTGC ATGCCAAATG GAAAATCTAC CGCAGCAAGG GCATCCGTAA AGTGGCCTCA
GCCAACCGCC CCCTCAGCCA ATATGAACCC AAACATTGGG TTGGTGGTCG CGCAGGTGGC
CGCTTAGAAA CCACCACCAC CGGGCGCTAC CTTGAAGAAG AACGAATTCT CAGCCGTTTT
GTGCAGACAA TCTCAGGCAA CTATCTACCC TTTGCCGTGG TGGTCAACGA TAACCTGCAA
TTGGTGCAGG TGCTGGGGGA TACCCTGGAC TATATGCGCA TCCCGTTCGG CTCTCCCATT
ACCGACATCT CCAAAATGGT GGCCGATGAT CTCTATATTC CCGTTTCTAC GTAA
 
Protein sequence
MVDLFLTHEA QGSWSCHPLL MLEERRDMSS NETTPPRTKL MDPVIANPPT HYIGIGASAG 
GLEAIQAFFS HMPANSGAAF IVVQHLSPDY KSLMVELLSK QTNMEVTRIT DGMPVEANTV
YLIPPKKNVK IFHGRLILTD QTHNNIGINL PIDIFFVSLA EDQGRKAVGI ILSGAGSDGT
RGVKSIKEKG GMVMVQEEAT AKFDSMPKSA IATNLPDFIL PPDEMPSQLL AFVKHPYATR
ELMTDKLAEK GTGLTRIFAL LRENSSIDFT FYKPSTVMRR IERRMTINQY EDLDDYVHFL
EANPREQTVL FRELLIGVTS FFRDADAYQI LQESIIPELV KNNTGKQIRV WASACSSGEE
AYSLAILFME AMQKSEAAVD IKIFATDVDQ DAIFRASQGA YPESIVADVP APLLNKYFMH
KGDNYHIIRQ VREMVVFAQH NIIKDPPFTN INFVSCRNML IYFQPVLQQK VLEGFNFSLA
TDGILFLGSS ETPGEMDSFF NTLHAKWKIY RSKGIRKVAS ANRPLSQYEP KHWVGGRAGG
RLETTTTGRY LEEERILSRF VQTISGNYLP FAVVVNDNLQ LVQVLGDTLD YMRIPFGSPI
TDISKMVADD LYIPVST