Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3378 |
Symbol | |
ID | 4483314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4208102 |
End bp | 4209340 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639724126 |
Product | major facilitator transporter |
Protein accession | YP_867270 |
Protein GI | 117926653 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0191855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.504281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTA AAAGCACCAT CAGCATTATC TTCTTTACCG TGTTTCTCGA CCTGCTCGGT TTCGGATTGG TCCTACCCCT ACTACCCAAC TACGCCAGCG ATCCCATGTT CCACGCCTCC ACCATGGAAA TCGGCGTGCT CATGGGGATC TACTCCCTCA TGCAATTTCT CTTTGCACCC CTCTGGGGCC GCCTCTCCGA CCACATCGGA CGCCGCCCCG TGTTAATCAT CGGCCTCTTC GGCTCCGCCC TCTCCTACCT GATCTATGGT CTGGCCGAAA GCTTAATGGT GCTCATCCTA TCCCGCGCCC TGGCCGGCTT TATGGGGGCC AATATCGCCG CCGCCCAAGC CGCTATGGCC GACCTAACAC CCCCAGAAAA ACGCGCCCAA GCCATGGGCA TCATCGGGGC CGCCTTTAGC CTAGGCTTCG TGCTCGGCCC CGCCATGGGC GGCTACCTCG CCAGTACCTA CGGGATCAGC GCCGCACCCC TGGCCGCAGC CCTCATCACC GGCCTCAACG CCGTGGCCGC TCTCTTCCTG CTCTCAGAAA CTCGTGACCT GAGCACCGAA CAACAACAAC CCCTAAGCAA ACGCGCCCAC CCCCTCTCCC TACACCCCTG GAAACAAGCG CGCAATTACC CAGGTGCCTT GATGGTCTGC CTGTTTATGG GCCTGTTTAT CACCCTGTTC GCCGCCTTTG AAATGGCCCT GCCCCTCTGG ACCCAAATCA TCATGGGCTG GGATAGCGGA TCCCAAACCA TGGCCGAAAA TGGACACCTG TTTGCCTTCG TCGGAGTGGT TATGGCCATC GTGCAAGGTG GCATCGTGCG GCGATTGGTG CCCAAAATTG GCGAAGTGCG TACCGCCTAC AGCGGCCTAA TCTGTATCGC CCTCGGTTTG ATGCTACTAG GACAAGCCAG CAACTATACC ACCCTGCTCA TCGCCCTCGG CCTCGCCGCA ACAGGCGCCG GTTTGGTCCA CCCCGCCTTC TCTTCACTGG TCAGCCTCAA TACCGATAAA GATAAACAAG GACTCATGAT GGGACTGTTC CAATCCATGG GCGCTCTGGG CCGCGTGCTA GGCCCCCTAT GGGCTGGCAT CGCCTTCGTC TCCCTCAAAG GTAACCTGTT TTTCGTCAGC GCTATGGGTA TGACTGTGCT GCTGGGCGCC CTCATCCCCC TCAGCCGAGA TCGCATTAAG GACGCCCGCC AAATAGCCGC GCAAGACGCA AAATCATAA
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Protein sequence | MKRKSTISII FFTVFLDLLG FGLVLPLLPN YASDPMFHAS TMEIGVLMGI YSLMQFLFAP LWGRLSDHIG RRPVLIIGLF GSALSYLIYG LAESLMVLIL SRALAGFMGA NIAAAQAAMA DLTPPEKRAQ AMGIIGAAFS LGFVLGPAMG GYLASTYGIS AAPLAAALIT GLNAVAALFL LSETRDLSTE QQQPLSKRAH PLSLHPWKQA RNYPGALMVC LFMGLFITLF AAFEMALPLW TQIIMGWDSG SQTMAENGHL FAFVGVVMAI VQGGIVRRLV PKIGEVRTAY SGLICIALGL MLLGQASNYT TLLIALGLAA TGAGLVHPAF SSLVSLNTDK DKQGLMMGLF QSMGALGRVL GPLWAGIAFV SLKGNLFFVS AMGMTVLLGA LIPLSRDRIK DARQIAAQDA KS
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