| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3355 |
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| Symbol | |
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| ID | 4482797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 4177380 |
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| End bp | 4179437 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639724103 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_867247 |
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| Protein GI | 117926630 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver
[COG3452] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0162851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAG CAAGCACATC CACACGTAGC TTTAGGGCAC CAAATCGGGT GGTGCTCTCA
GGGGGTTTGA CCCTGCTGTT GAGTCTGTTG TTAACCGGTT TATTGGCTGT GCAGGAAAAT
GGCCGCTACC AAAACCAGTT GCGGGTAACC GTGTTAGAAC AGCTCAGCCA ACTGCGAGGT
CTTTTAGAAA ATGAGATTAA TCTTAGCTTT CACCTCACCA TGGGTCTGCT GGCCTATGTG
GCCATTGAGC CAAACATAAG TCAGCAAAAT TTCCAGCTTA TGGCCCGCGA AATCATTGCG
CAGAGTCGCA ATATTCGAAA TTTAGGTTTG GCCCCTGACA ATGTGCTTAG CTACATCTAT
CCCCTTAGCG GTAACGAGCG GGCGTTAGGG TTGGACTATC GCAAAAATGC CAAGCAGTGG
CCTGCGGTGC AGTTGGCCAT TAGCGAACGG CGTACGGTGG TGGCCGGTCC GGTAAAATTG
GTGCAGGGTG GGGAAGCGTT TATTAGCCGA ACACCCATCT ATCGCACGGG AATGGATGGA
AAAAAAGGGG CTTACTGGGG GTTGGCAAGC ACGGTCATTG ATAAAGATAA GCTGTTTACT
ACGGCGGGTA TCTATGAGGT ATCCAAGCAG ATTAAACTGG CCATTCGTGG GCGTGACGGG
CTGGGGGCGC AGGGAGATCT GATCTCGGGT GAGGGTGAAC TGTTTAATGA GCGAGCTGTC
CTGCAAAATG TGCAACTGCC CGATGGTCGT TGGCAATTGG CGGCCGAGCC CTTAAACGGG
TGGGATCAGG ATTCGCCCTA TGTGCCCGTG ATATGGGGTG CCGGTATTGG GGGAGGAATG
CTGGCTGGTG GGTTGGTCTA CCTGTGGTTG ATTGGCGTGG CGCGGCACCA ACACATCCTG
CAACAGGCCT TGCAGGATGC CCAGGCGGCT GATCGGGTAA AGAGTGAATT TTACGCGACC
ATGAGCCATG AGATTCGCAC CCCAATGAAC GTGGTGCTGG GCATGAGTGA TATTCTGCTG
GAGACGGTGC AAGAGCCTGA ACAGCGCCAG CAGTTGGCCC GCTTGCAACA GGCCGGTAGT
GCCCTGTTGG AGTTGATCAA TAATATTTTA GACATATCCC GCATTGAGGA GAAGCGCTTA
ACCCTCCATA TGGCGCCTAT GGATTTACGG TCTTTGGTAG AGGATCTGCT GGGTTTCTTT
CAACTCCCTT ACCATGAGAA AGGGATCGCG CTGGTGAGTG AGTGGGAGCA GGGCTTGGCC
ACCCATATTT TGGGGGACAG TGGACGGCTA AGGCAGGTAT TGACCAATCT ATTGGGGAAC
GCTCTTAAAT TTACGGAGCG GGGGCAGGTG GTGGTGGTGG TGCGTCGGGA TCCCGAGGAT
GCCACCTACT TACGTATTGA GGTTAGGGAT AGCGGGATTG GTCTACATGC CGATCAGCTT
TTGCATATTT TTGATAAATT TACGCAGGCT GAATCGGGTC TGACGCGGCG TTATGGTGGC
AGCGGTTTGG GTTTGGCTAT CTGCAAGCAG CTGGTGGTGT TGATGGGGGG GCGTATCTGG
GTAGAGAGCG AGGATGGGGT GGGTAGTTGT TTTATCTTTA CCTTGCCCTA CCAGGAGGTT
ACAGAACTTG AACGGCGGCA GATGCAGGAT GAAGCGGCGG AGTGGTCGGT TGATGTGCCG
CGCAAAGTGT TGCTGGTTGA GGACTCTGTG GACAACCAGC AGCTTATTGT CGCTTATTTA
AAAGCTAGCC CTTATCAAGT GAGCATTGCC CAAAATGGTG CCGAAGGGGT GGCGATGGCC
AAACAGGATG CCTACGATCT TATTTTGATG GATATGCAGA TGCCGGTGCT GGATGGCTAT
GCGGCGACGC GCTCCATCCG CCAGTGGGAG CGGCAGCAGG GGCGCGAGCC GGTGCCCATT
GTGGCGCTGA CGGCCCATGC CTTGGAGGGG GATTTAGAGA AGAGCATAGA GGCGGGCTGT
AGTCTCCATT TGACCAAGCC CATACGCAAG GCTCAACTCC TTAACCAGCT GCGCGGCTTT
TTTAAAGAGG CCCCTTAA
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| Protein sequence | MDRASTSTRS FRAPNRVVLS GGLTLLLSLL LTGLLAVQEN GRYQNQLRVT VLEQLSQLRG
LLENEINLSF HLTMGLLAYV AIEPNISQQN FQLMAREIIA QSRNIRNLGL APDNVLSYIY
PLSGNERALG LDYRKNAKQW PAVQLAISER RTVVAGPVKL VQGGEAFISR TPIYRTGMDG
KKGAYWGLAS TVIDKDKLFT TAGIYEVSKQ IKLAIRGRDG LGAQGDLISG EGELFNERAV
LQNVQLPDGR WQLAAEPLNG WDQDSPYVPV IWGAGIGGGM LAGGLVYLWL IGVARHQHIL
QQALQDAQAA DRVKSEFYAT MSHEIRTPMN VVLGMSDILL ETVQEPEQRQ QLARLQQAGS
ALLELINNIL DISRIEEKRL TLHMAPMDLR SLVEDLLGFF QLPYHEKGIA LVSEWEQGLA
THILGDSGRL RQVLTNLLGN ALKFTERGQV VVVVRRDPED ATYLRIEVRD SGIGLHADQL
LHIFDKFTQA ESGLTRRYGG SGLGLAICKQ LVVLMGGRIW VESEDGVGSC FIFTLPYQEV
TELERRQMQD EAAEWSVDVP RKVLLVEDSV DNQQLIVAYL KASPYQVSIA QNGAEGVAMA
KQDAYDLILM DMQMPVLDGY AATRSIRQWE RQQGREPVPI VALTAHALEG DLEKSIEAGC
SLHLTKPIRK AQLLNQLRGF FKEAP
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