Gene Mmc1_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3347 
Symbol 
ID4481623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4168998 
End bp4169672 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content57% 
IMG OID639724094 
Productnicotinate-nucleotide adenylyltransferase 
Protein accessionYP_867239 
Protein GI117926622 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000291311 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACCG CATTTCGCCA ACATCTCGCC CGGCGTATCG GTATCCTAGG GGGCTCATTT 
AACCCGCCCC ATCTAGGCCA CCTGCGCTCC GCCATGGAGG TGATGGAAGG GTTGGGGCTC
GACGGTATGC AGCTTATCCC CAGCGGGGCC CACCCCTTTA AAGGGCGTGA AATGCAGGCA
ACCCCCGAAG AGCGGCTGGA TATGGTACGC CTGGCCGTAA GCCGCGAACC CCGCTTTGAA
GCCAATGATA TCGAAGTGCT ACAAGATGGC GTAGGCTATA CCATCGATAC CCTACGTAGC
CTCGCACGCA GCCGCCCTAC CATCGAGTGG GTGTTGGTGC TGGGTAGCGA CCTGCTGAAT
GAACTACACC TGTGGAAAAC GTGGCAATTG CTGATAAAGT ACGCCCACCT GTGTATTATG
ACCCGACCCG GTTATATCGT GGATCTGCAA CAGACCGAAG CCGGACGCTT TTTGGAACCT
TTCATGGTGC AGAGTCCCGA ACTGCTCTAC CGTGAAGAGA TGGGACGTAA CGGTGTGATT
ATTCAACCGG TTACGCCAAT GGGAATTAGC TCCACCGCCA TGCGCGAAGC GCTGGTGGCG
GGGCGCAGTA TCGACTATCT CACCCCCACA CGGGTGGTGA ACTACATACA GAAGCAGGAG
CTGTACCGCC CATGA
 
Protein sequence
MVTAFRQHLA RRIGILGGSF NPPHLGHLRS AMEVMEGLGL DGMQLIPSGA HPFKGREMQA 
TPEERLDMVR LAVSREPRFE ANDIEVLQDG VGYTIDTLRS LARSRPTIEW VLVLGSDLLN
ELHLWKTWQL LIKYAHLCIM TRPGYIVDLQ QTEAGRFLEP FMVQSPELLY REEMGRNGVI
IQPVTPMGIS STAMREALVA GRSIDYLTPT RVVNYIQKQE LYRP