Gene Mmc1_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3330 
Symbol 
ID4483369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4148660 
End bp4149109 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID639724077 
Producthypothetical protein 
Protein accessionYP_867222 
Protein GI117926605 
COG category[S] Function unknown 
COG ID[COG5389] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAG TCGTCGCGCC ATGGATGGAA CATCCCACCG GACAGGCCAG CTTAATCTGG 
AAATATTGGC ACCGTGCCAT CTCGCCCCAC ATTGCCCAAC ACACCGAACC GGTACGCTTA
AACAAGGGGG TTTTGACGGT GCGGGTGGAT TCTGCCAGTT GGGCACAGGA GTTATCTTTT
TTAAAAACCG AGTTGTTGGA ACATTTAAAC CGCGTCCTGC CCGAGCCTTT GGTCGCGGAT
ATGAAATTTG TGCAAGGGCC GCTCAAGCGT CATCAACAAC AGCGCCCGCC AAACCCAAAG
ACCCCCCTTC CCCCCCCCCG GCCCGACGAG CAAGAGAAGG TGCGTGCCAT TGTCGCCCAT
GTGGCCGATG CAACCCTGCG AGAAACCCTC TACCGCACCC TTACCAAACA TCTGGTCTGG
ATGCGTCTGC ACCGCTCCCC TTTTAAGTAG
 
Protein sequence
MGKVVAPWME HPTGQASLIW KYWHRAISPH IAQHTEPVRL NKGVLTVRVD SASWAQELSF 
LKTELLEHLN RVLPEPLVAD MKFVQGPLKR HQQQRPPNPK TPLPPPRPDE QEKVRAIVAH
VADATLRETL YRTLTKHLVW MRLHRSPFK