| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3306 |
|---|
| Symbol | |
|---|
| ID | 4480670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 4121443 |
|---|
| End bp | 4122351 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639724056 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_867201 |
|---|
| Protein GI | 117926584 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGTG TTGTCCAAGC GACGGACCTA ACCAAACAGT ATCAGAATAC GCCAGTTGTG
CACGGAATCA ACTTTGAGAT TCATGGGGGC GAGTGTTTTG GCATTCTCGG CCCCAACGGT
GCGGGTAAAA GCACCACCAT GCGCATGGTG ACAGGGCTCT CCCCGGTGGA TGGCGGCGAG
CTGTTGGTGT TTGACCAGCC CATGACCCCC GAAGCCACCC AGGTACGCCG CCGTTTAGGG
GTGGTGGCTC AAGAGGATAA TCTGGACGAT GACCTGTTGG TTTGGGAAAA TATTCTGGTT
TATGGTCGTT ATTTTCAGTT GTCCGATCGC CAGATCAAGC CGCGTATTCA GCAGCTTTTG
GCCTTTGCCA AGTTAGAAGA TCGTGCCAAC GCCCCGGTGC GCACCCTCTC TGGGGGGATG
AAACGCCGCT TAGTGATTGC GCGGGCGCTG GTCGCCGAAC CGGAGCTGAT GGTGTTGGAT
GAGCCCACCA CTGGGTTGGA TCCCCAGGCG CGGCACCTAA TCTGGCAGCG CTTGCGTCAA
TTACGGGAGC AGGGCATTAC CCTGCTGCTG ACCACCCACT ATATGGAGGA GGCCGCGCAA
CTGTGCGACC GTCTGCTGAT TTTAGACAGT GGTCACATTT TGGATCAGGG CACCCCGCTG
GAGCTGATTA ACCGCCATGT GGAGCCCGAG GTGGTGGAGG TGCGTTCCAG CATCCCCTTG
CTGTTGGCGG AGTTGCCCAA GTTGCCTGCC CGTTTGGAGC AGGTGGGGGA TACCCTCTTT
TGTTACACCC ATGAAGCGCG GGCTGTGTTA GAAAAGTTGG GCAACCGCCA TGATCTAACC
CTGCTGGCCC GCCCGGCCAA TCTGGAGGAT GTGTTTTTAA AACTGACGGG CCGGGAGCTG
CGGGATTGA
|
|---|
| Protein sequence | MACVVQATDL TKQYQNTPVV HGINFEIHGG ECFGILGPNG AGKSTTMRMV TGLSPVDGGE
LLVFDQPMTP EATQVRRRLG VVAQEDNLDD DLLVWENILV YGRYFQLSDR QIKPRIQQLL
AFAKLEDRAN APVRTLSGGM KRRLVIARAL VAEPELMVLD EPTTGLDPQA RHLIWQRLRQ
LREQGITLLL TTHYMEEAAQ LCDRLLILDS GHILDQGTPL ELINRHVEPE VVEVRSSIPL
LLAELPKLPA RLEQVGDTLF CYTHEARAVL EKLGNRHDLT LLARPANLED VFLKLTGREL
RD
|
|---|
| |