Gene Mmc1_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3230 
Symbol 
ID4483731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4023393 
End bp4023734 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content49% 
IMG OID639723979 
Producthypothetical protein 
Protein accessionYP_867126 
Protein GI117926509 
COG category[R] General function prediction only 
COG ID[COG3950] Predicted ATP-binding protein involved in virulence 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0080421 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.477245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTATTAA GGGGTATTCC ACTGCGGCCC CCGTGCGTTT TTTTAGTAGA AAGTCGTGAC 
CCTATGAGAT TGACCCGCGT TACCCTTGAG CACTACCGCC GATTTAAACA GTTGGAGATT
CAACTTGGCA ATGCGCCCAT TGTCGTTTTG ATAGGGAATA ATGGTGCGGG TAAAAGCTCA
ATATTAGAGG GGGTCGCCAA AGGTTTGAGC TGGTTAACGG CGCGGATTCG ACGAGAGCAT
GGCACGGGAC GCCCGATTTT ATTGAATGAG ATTTTTTGTG TAACGCCGAG AATCACTGTG
GAATTTACCG TGGAACAGAT CCGCTCCCCA TTACACCACT GA
 
Protein sequence
MLLRGIPLRP PCVFLVESRD PMRLTRVTLE HYRRFKQLEI QLGNAPIVVL IGNNGAGKSS 
ILEGVAKGLS WLTARIRREH GTGRPILLNE IFCVTPRITV EFTVEQIRSP LHH