| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3189 |
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| Symbol | |
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| ID | 4482946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3971680 |
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| End bp | 3974907 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639723938 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_867085 |
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| Protein GI | 117926468 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGAT TGGTCAAATG GCTGCTGGTG CTGGTGCTGC TGCCGGTGGT GGCAGATGCC
CAACAAGGGG AGCGTCCTTG GCCGGTTACG GTTGCGGTGT TGCAGGATTT TCCCCCCCTC
TACAGCTTAG ATACCCACGG AAAGCCCCAA GGATTGGCCA TTGATCTGTT GCAGCAGGTT
GCTCAGCAGG CCCAGTTAAA GATCACCTAT AAAGTGGTTC AAAATTGGGG TCAAGCGATG
CAGTTGGTGC GTCAAGGCGA AGCTGATTTT GTACCAGGAA TCGGTATCAC TGAGGTGCGA
CGCGCCGAGT TTCTTTTTTC CCACCCTATG GAGAGCGTAC CGGTCTCCTG CTTTGTGCGT
AAACAGAACC GCAGTATCCA GGGTTTGCAG GACCTGCCCG GCTATAGCGT GGGGGTGATC
GCCCAAAGCG CGGCCCATAC CCGGCTCAGC CAAATACCCA ATATGCGCTT AAAGCTCTAT
CAGAGTATTG ATGAAGCCTT TTTTCAACTT TTGGCGGGGG AACTGGATGC CTTTGTGACT
TCCCGCCCGG TGATGGAGAA AAAAGCCCGG AAGATTGCTC CTCAAGAGAT GATTAAGGTG
GTGGGTGAGC CGCTGATGGA TTTAAAGCGG GGTTATCTGC TATCCACGCA GAACCGTGCT
TTGTTGCAGC GTATAGATCC TATTATTCAG CATCTTACAC GGTCTGCGAG GTATGGTGAA
ATCTATGCCC GCTGGTATGG TACCGCCGCC CCCTTTTGGA GTGTGGAGCA GGTTTTTTGG
ATCATGTCGG CGCTGTTGGT GGCCGTGTTG GTGGTTGGGG GGCTCTACCG TGTGTTTGCC
ATAGCCCGCT ATAATCGGGA GTTACAGCGC AGCATCGCGG CCCAGCAGCA GGCCGAACAG
CGGTTGCAGC GCAGTGAAGA GCGCTTTGCT CTGGCGATGC GGGGCAGCAA TGATGGGTTG
TGGGATTGGG ATATACCCAC CGATAGGGTG ACCTTTTCGC CCCGTTGGTT GGAGATGCTC
GGCTACCAAG GAGCACCGCA AGATGCCGAT ATGCGCCACT GGCAGGCCCA TATTCACCCC
GACGATCAGC CACGGGTAGA GCAGGCGTTG GGGCGGTTTT TGTCCGGCGA CCAGCAGCAC
TATCACTCTG AATATCGCAT GCGCCATAAG GATGGACACA CCATCGCCGT ACTTTCGCGG
GCGTTTGTCT TGCGGGACGC CACAGGCCGC GCCATACGTA TGGTGGGCAC CCATGCCGAT
ATCACCGCAC TCAAAGAGCA AGCGCGGCGC TTGCGTGAGA GCGAGACGCG GTTTCGCGCC
TATTTTGAAC AGTCGGTGGT GGGTATGGTG ATGGCCAGCC TAGATCGCCA CTTTATAGAC
GCCAACCACG CCTTTTGCCA TATGTTGGGC TATTCCCGTG GTGAGTTGTT GAAAATGAAT
TTTCCCCAGA TCACCTACCC CGATGATCTG GAACGGGACC TTGTACAGTT TGAGCAATTA
CGGAGCGGCC AGGTTAGCGC TTTTGAGATG GAAAAACGTT ATCTGCATCG CGACGGCCAT
CCTGTATGGG GGTTGCTCAG CGCCACCACC GTCAAAGATG AACTGGGCCA AGCCAGCTAC
TTGATTGCCC AAGTGCAAAA CATTGATACC CAGAAAAAAG CACTGGAGCA GCTGCGCCAA
AGTGAATCCA TGATGCGGGG CTATTTTGAG CTGGGATTGA TCGGTATGGC CACCACCACC
GCCCAACATG GCTGGGTGCA GATCAACCAG CGGTTGTGCG AAATTTTGGG TTATCCCGAA
ATGGCGTTGC GCCAGAAAAG TTGGGCGGAG ATCACCCACC CACAAGATCG ACAGGCCGAT
GAGGTGGCCA TTGAGCGGCT ACGCAAGGGA CTCAGTGAGG GCTACGCGCT GGAAAAGCGC
TTTATCCGTC AGGATGGCGC GTTCATCTAT GCCAGCATAT CGGCGGGATG TTTGCGCAAG
GAGGGGGGGG AGATAGGCCA TTTTTTAACG CTGGTGCAGG ATATCACGGC ACGTAAGCGC
ATGGAGTTGG CCCTACAGGA ACAGAAGGAG CAGGCCGAAG CGGCCAACCG GGCCAAGAGC
ACCTTTTTGG CGGTGATGAG CCATGAAATT CGTACCCCCA TGAATGCCAT TTTGGGTATG
GCAGAGCTGC TACGGGAGAG TGACCTGACC AGCCGACAGC ATTGGTGTGT GGAGACCTTA
AACCGTTCTG GTGAGAGTTT GCTGTCGTTG ATCAACGATA TTTTGGATCT TTCCAAGATT
GAGGCCGAGC GCTTAACCCT AGAGCATGTG GTGTTTGATC TGGTGCAGCT GGTAGGGGAT
GTCTGTAGCC TGTTTGGGTA TGAGGCGCAA AGTAAGGGTT TAGCGTTAAA GCATCACATC
GCCCCTACAC TGCCCCGCTA TGTGGTGGGT GACCCCATCC GCTTGCGGCA GATCATGATG
AACCTGGTGG GCAACGCGGT TAAGTTTACC AAACAGGGGC ATGTGTCGGT TGAACTAAAT
CCCCTCGCGG ATGGGCGGCT ATCCTTTGTG ATCCGTGATA CCGGTATTGG GGTGTCCGTG
GAACAGCAGC GCAATATCTT TAAGCCCTTT ACTCAGGCAG ACTCCTCCAT AACCCGTGAG
CATGGGGGTA CGGGGTTGGG CTTGACCATC TGCATGCGGT TAGTGGCATT GATGGGGGGT
GAAATGCAGT TAGAAAGCAC CCTGGGGGAA GGGAGCTGTT TTCATTTTGA GTTGGAGCTG
CCTGCGGCCC CGCCGGGTGC CGAGTCGGTT GTGGGTACGC CGCGCACCTT GGCCGATGTA
GCCAGTGCAT TACGCTTAGA GAGTGCCGCA CACCATAATG ATCCCATTTT GGTGGTGGAT
GATGCCGAAG ATAATCGTAT GCTGGTCAAC GTTTTTTTAA AGAAAACCCG TTATACGCTG
GTGATGGCAG AAAATGGGCT TGAGGCCGTC AATGCCTTTA AACAGCAGCC CTTCGCGTTG
GTGTTAATGG ATATTCAAAT GCCCCTTATG GATGGCTACG AGGCAACCCG CCAGATTCGC
CAATGGGAGC AGCAAAAGGG TAGTGGACGC ACGCCCATTA TCGCATTAAC CGCCCACGCT
TTGAGTGAAG AGTCGCAGCA GATTTTAGAA GCAGGCTGTG ATATCCACCT GACCAAACCC
ATCCGCAAGA GCAAGTTATT AGAGGTTTTG GCCGAGGTTT TGGCCTAG
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| Protein sequence | MSRLVKWLLV LVLLPVVADA QQGERPWPVT VAVLQDFPPL YSLDTHGKPQ GLAIDLLQQV
AQQAQLKITY KVVQNWGQAM QLVRQGEADF VPGIGITEVR RAEFLFSHPM ESVPVSCFVR
KQNRSIQGLQ DLPGYSVGVI AQSAAHTRLS QIPNMRLKLY QSIDEAFFQL LAGELDAFVT
SRPVMEKKAR KIAPQEMIKV VGEPLMDLKR GYLLSTQNRA LLQRIDPIIQ HLTRSARYGE
IYARWYGTAA PFWSVEQVFW IMSALLVAVL VVGGLYRVFA IARYNRELQR SIAAQQQAEQ
RLQRSEERFA LAMRGSNDGL WDWDIPTDRV TFSPRWLEML GYQGAPQDAD MRHWQAHIHP
DDQPRVEQAL GRFLSGDQQH YHSEYRMRHK DGHTIAVLSR AFVLRDATGR AIRMVGTHAD
ITALKEQARR LRESETRFRA YFEQSVVGMV MASLDRHFID ANHAFCHMLG YSRGELLKMN
FPQITYPDDL ERDLVQFEQL RSGQVSAFEM EKRYLHRDGH PVWGLLSATT VKDELGQASY
LIAQVQNIDT QKKALEQLRQ SESMMRGYFE LGLIGMATTT AQHGWVQINQ RLCEILGYPE
MALRQKSWAE ITHPQDRQAD EVAIERLRKG LSEGYALEKR FIRQDGAFIY ASISAGCLRK
EGGEIGHFLT LVQDITARKR MELALQEQKE QAEAANRAKS TFLAVMSHEI RTPMNAILGM
AELLRESDLT SRQHWCVETL NRSGESLLSL INDILDLSKI EAERLTLEHV VFDLVQLVGD
VCSLFGYEAQ SKGLALKHHI APTLPRYVVG DPIRLRQIMM NLVGNAVKFT KQGHVSVELN
PLADGRLSFV IRDTGIGVSV EQQRNIFKPF TQADSSITRE HGGTGLGLTI CMRLVALMGG
EMQLESTLGE GSCFHFELEL PAAPPGAESV VGTPRTLADV ASALRLESAA HHNDPILVVD
DAEDNRMLVN VFLKKTRYTL VMAENGLEAV NAFKQQPFAL VLMDIQMPLM DGYEATRQIR
QWEQQKGSGR TPIIALTAHA LSEESQQILE AGCDIHLTKP IRKSKLLEVL AEVLA
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