Gene Mmc1_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3135 
Symbol 
ID4483130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3908209 
End bp3909048 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content57% 
IMG OID639723883 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_867031 
Protein GI117926414 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.740034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA CCATACTATT GGTGGGGCAT GGTTCCCGGC ATGCCAAGGG TAATCGTGAA 
GTGGAGAAGT TTGCCGAAAT GTGGCAAAAG CGGCATGGGG ATTGGCGGGT AGAGCTTTGT
TTTATTGAGT TTGCCGAGGT TTTGTTGGCC CAGGGGTTGG ACCGCGCCGC CCAGGGTTCG
ACACGGGTGG TGGTGGTGCC CCTGGTGATT AATGCGGCGG GGCATGTCAA GATGGAGATC
CCAGAGCAGT TGGCGGCGGC GCGGCAGCGG CATGAGGGGG TCGAATTTGT CTATGTTTCA
CATTTTGGCT CGGTAGAGGG GGTGTTTAAG GCGGTGAAGC GGCAGTTGCA CCGGGCCATG
TTGGAGATGC ATCTGCCGGA TCCTTGCACC ACCGGGGTGG TGGTGTTGGC GCGGGGTTCG
TCGGACATCG GGGCCAATGG CGAGGTGGCC AAAATGGCCC GCTGGATCTG GGAAGAGACC
CCCCATGAGC TGGTGGATAT CGCCTTTACG GGCATCACCT TTCCCCGTTT GGAGCAGGTG
GTGCAGCGTC AGGTAAAGTT GGGTATGAGC CAGATTGTGG TGGCCCCCTA CTATCTGTTT
ACCGGCACCT TGATGGAGCG CATTCGGCAG CAGGTGGCTC GCTTGGAGCG GCAGTATCCG
ACGATTGCTT TTGCCTTGGG GGGCTATTTT GGTTTTGAAG AGGAGATTTT TGACCTCTTG
GATCACAAAG TGGGTGAGGC GTTGACGGGG GTAGGTCACC AGCCGTTAAT GGAGTGCGAT
GGCTGTAAAT ATCGCGCTTT TGCCCAAGAG CATGGACATG GGCAGCATCA CCACCACTAA
 
Protein sequence
MSDTILLVGH GSRHAKGNRE VEKFAEMWQK RHGDWRVELC FIEFAEVLLA QGLDRAAQGS 
TRVVVVPLVI NAAGHVKMEI PEQLAAARQR HEGVEFVYVS HFGSVEGVFK AVKRQLHRAM
LEMHLPDPCT TGVVVLARGS SDIGANGEVA KMARWIWEET PHELVDIAFT GITFPRLEQV
VQRQVKLGMS QIVVAPYYLF TGTLMERIRQ QVARLERQYP TIAFALGGYF GFEEEIFDLL
DHKVGEALTG VGHQPLMECD GCKYRAFAQE HGHGQHHHH