Gene Mmc1_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3072 
Symbol 
ID4483154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3840474 
End bp3841535 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID639723820 
Productresponse regulator receiver modulated metal dependent phosphohydrolase 
Protein accessionYP_866969 
Protein GI117926352 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000480818 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAAA AAATTTTGGT GGTGGATGAT GCTCCGGCCA ACCTGCGGAT TCTGGTGGAG 
TCGTTGAGTG ACGAGTACTC CATTGCCGCC GCAAGGGATG GCCATAAGGC CATCGCGCTC
GCCAACGCCA AGCACCGTCC AGACCTTATC CTGTTGGATG TCATGATGCC CGGTTTAGAT
GGGTTTGAGG TCTGCCTTAA ACTCAAAGCG GACCCTGCCA CTTGGGATAT TCCCGTGTTG
TTTATCACCG CCCTGAACGA TGAAGAGAAT GAGGTCCGTG GTCTGACGGT GGGCGGGGTG
GATTTTATCA GCAAACCGTT CAATCCGGCG CTGGTCAAGG CGCGGGTGCG CAGCCATTTG
GAACTCAAAA GCCACCGGGA CCGGCTGGAG GAGTTGGTGG TCAATCGCAC CCGTGAGCTG
TTACGCACCC AGGATGTGAC CATCAACGCT TTGGCATCGC TGGCCGAGAC GCGGGATCCA
GAGACAGGGG GGCATATCAA ACGTACCCAG CACTATGTGC GTCTGCTGGC AGAACAATTG
ATTGATCATC CTGATTTTAT GGAGTTACAG GAGCCTGGCA TGATCAATCT CTTGTATAAA
TCATCCCCGC TGCACGATGT GGGTAAGGTC GGTGTGCCCG ACCATATTTT GCTCAAACCC
GACACCCTCA CTCGCGAAGA GTTTGAAGAG ATGAAACGCC ATGCCGACTA TGGTTGGAAG
GCCTTGGACG GGGCGATGCG GGAACTGGGG GATAATTCGT TTTTGCGCGT GGCGGCGGAA
ATTTCTTATA CCCACCATGA AAAATGGGAC GGTAGTGGTT ATCCAAGAGG TTTGGCAGGG
CGAGAGATCC CCGTGTCTGG CCGGTTGATG GCCCTGGCGG ATGTCTATGA CGCCCTGATC
TGTCGTCGTG TTTACAAACC CCCCTTTACC CATGAACAAG CCACCGAGAT TATTCTACAA
GGGCGCGGGC AGCATTTTGA CCCAAATGTG GTTGACGCCT TTTTGCGTCT GCAACACCCT
TTTCAGGAAT TGGCCCAACA GTATGCGGAC AGCGCGGAAT AG
 
Protein sequence
MKQKILVVDD APANLRILVE SLSDEYSIAA ARDGHKAIAL ANAKHRPDLI LLDVMMPGLD 
GFEVCLKLKA DPATWDIPVL FITALNDEEN EVRGLTVGGV DFISKPFNPA LVKARVRSHL
ELKSHRDRLE ELVVNRTREL LRTQDVTINA LASLAETRDP ETGGHIKRTQ HYVRLLAEQL
IDHPDFMELQ EPGMINLLYK SSPLHDVGKV GVPDHILLKP DTLTREEFEE MKRHADYGWK
ALDGAMRELG DNSFLRVAAE ISYTHHEKWD GSGYPRGLAG REIPVSGRLM ALADVYDALI
CRRVYKPPFT HEQATEIILQ GRGQHFDPNV VDAFLRLQHP FQELAQQYAD SAE