Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3021 |
Symbol | |
ID | 4483532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3779592 |
End bp | 3780290 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639723768 |
Product | sugar fermentation stimulation protein |
Protein accession | YP_866918 |
Protein GI | 117926301 |
COG category | [R] General function prediction only |
COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGTATC CAACGCCACT AACGCCCGCC CGCATGGTGC AACGCTATAA ACGTTTTTTA AGCGATGTCA CCCTGGCCGA TGGCACTCAA GTAACCGCCC ACTGTGCCAA CTCCGGCTCC ATGCGCGGGT TGGTGCATGT GGGTGAGCCT GTCTACCTCT CCCACTCGGA CAACCCCAAG CGCAAACTGG CCTGGACCCT GGAGTTGGTG TGCGATGGTG GCGCGCTGGT TGGGGTCAAT ACGGGCTTGG CCAATGCACT GGTGGCCGAG GCGCTACAGC AAGACCGCAT CCCCCCTTTA CAGGGGTTTG CCCACTTTAG GCGAGAGGTC CCCTATCAGG ACTCTCGCCT GGATTTTTGC CTAACCGCCC CCGCTGGTGC GTTAACCTAT GTTGAGGTGA AGAGCGTTAC CCTGCGCTTG ACCGACGAAG CCGCTTTTCC CGACGCGGTA ACCAAGCGCG GCGCAAAACA TCTGGCGGCT TTGCGCCATG CGGTTAAAGC TGGACATCGG GGGGTGATCC TGTTTATTGT CCAGCGTTCG GATCTCGACC ATTTTCGCCC TGCTCATGAG ATTGATCCAG GCTATGCCCA GACGCTACAA TGGGCGATCT CCGAGGGGGT TGAAATACTG GTTTATGCCT GCGCGCTCAC CACGGCATCC ATCTACGTTG AACGCCCTTT AAGCTATACG CTCGGTTGA
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Protein sequence | MEYPTPLTPA RMVQRYKRFL SDVTLADGTQ VTAHCANSGS MRGLVHVGEP VYLSHSDNPK RKLAWTLELV CDGGALVGVN TGLANALVAE ALQQDRIPPL QGFAHFRREV PYQDSRLDFC LTAPAGALTY VEVKSVTLRL TDEAAFPDAV TKRGAKHLAA LRHAVKAGHR GVILFIVQRS DLDHFRPAHE IDPGYAQTLQ WAISEGVEIL VYACALTTAS IYVERPLSYT LG
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