| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_3010 |
|---|
| Symbol | |
|---|
| ID | 4483241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3763452 |
|---|
| End bp | 3765341 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639723757 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_866907 |
|---|
| Protein GI | 117926290 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTAT CCCTTGCTGC GCGACAACAT CATCTGGCCA CATCGGTTCA GGGGAAATTG
ATCCTAGCTA CCGCACTTGG TGCCGCCATG GCGCTGGCAA GTCTGCTTTT TTTATTCCAG
TATCTCTATC AACAACAGTT GACCCAAGGT GCCCATAGCA TGGCGGCCCA GGTGCAGTTA
CTGTTTAAAG CCTCCTTAGA AAATGCCATG CTCAAACGCG ACTTAGAGGG CTTAGATGAT
ATTGTGCAAA AGCTCGCCCA GCAACCGGGC ATTCAAAATG TTATGATTCT TAACCCGGTT
GGTGAAGTGC GTTTTAGTTC GAACAGCAGC GACCTTTATC AAATACTTGA CCCCGAGGCC
ATGCCCGACC AAGTTAAGCA GCCTAGCAAC CGTTTTATGC AAGACCGGCA ACAACAAGCG
GTCCTGCGTA GCTACTTCCC GGTGCCCAAC CAAGCCCCTT GCCAGGTCTG TCATGGCAGC
CTAGAGCATT CCCCAATCAA TGGGATCGTG GCGGTTGATT TCGCGGCGCA AGCCGTTGAA
CACGAGGCAC GGCATAAGAC CATGCTGTTA TTCTATGTGG CACTGCTTAT TTTACTGTTA
AGCATGCTGT TTGCATGGCT AGCGGCACGG CGTGTTATTT TGCAACCCTT AGCCGCGCTT
AGCCAACTGG CGCAAACCTT TGCCATGGGG GATCTGCAAG CACGCAGCAC CCTAGCGGGC
CAAGATGAGC TCCACCAACT GGGCCGCACC CTTAACCAAA TGGCGGACAA TCTACAAATA
ACCCTGCGCC GTCTGGCGGA GCAGGAAGCC TATACCCACT CCATTTTAGA TCAGCTCCCC
GATGGGGTGC GGGTGATTGA TGGACAGATG CGCACCCTAT TAACCAACCG TATTTTCCGC
GAACGCTTAG GGTTGGAAGA GGATGCCGCA GAGATGGCCC CCTGTTTTGC CGTTAGCCAT
GCCCGCACCA CCCCCTGCCC GCCTACCCTT GTTACCTGTC CGGTATATGA AATTTTGGAC
AAACCGGGGC AACGTTTAAA ATCTCTACAG ACCCACCTGC ATACCGATGG GCAGCAGGAG
CTACAAGTTG AGGTGGTTGC CTCAGCGGTC GAGATTCTAA AGGAGGGTAA ACCCGTCAAG
GTTATTGTCG AATCGGTGCG GGATATTAAA GAGGCCATGG CCTTTGCCCA CGGGCAAAAG
CTGGCGGTGT TGGGCCAATT GGCTTCGGGC ATCGCCCATG AAGTACGTAA TCCCTTAGCC
AATATACGCT TTGCCATACA GTCTAACCTG CGTGGGGCCA GCATTACCAC CGAACAGTTA
GAAGAGACGG TGGCCCTTAC CGAACAAGCG GTCGATCACT GTATTGAGAT CACCGAACGC
ATTTTAAAGC TGAGCGAAGC CCCTGGCGAG TTATCCCTAT TAGAGCTTAA CAGCCTGAGC
CAAGAGTGCG TCGCGCTCAT GGCCTGGAAC GCACGGGAAC ACTCGGTTAA CATGCAGATT
GAGCTTTCTA ACCAACAACC TCGCACTCTA GCGGCGGATA GTGACCTACG CATTATCTTG
CTCAATCTCA TGCAAAATGC CTTGCACGCC ATGCCCCATG GCGGCTCTTT GCGCGTTGGT
ACCAGCCGTG GCAATGGGCG TGTGGCCTTT GTGGTCGAGG ATAGCGGTGT CGGCATGGAC
CCCCTTATAC AGAGCCACAT GTTCGACCCC TTTTTCAGTC GCCGTGCCGA TGGCAGTCGC
GGTGCGGGTT TGGGCTTAAC CTTAGTTCAC TCGCTGGTTA GCCGCTATAA TGGCCAGATT
ATGCTGGATA GCACTCCCGG CAAAGGCAGC CGTTTTACCA TCACCTTAAC CGATGCAGAC
ACACCGCTTC CTCTCGGGGA GGAGGTTTAG
|
|---|
| Protein sequence | MRLSLAARQH HLATSVQGKL ILATALGAAM ALASLLFLFQ YLYQQQLTQG AHSMAAQVQL
LFKASLENAM LKRDLEGLDD IVQKLAQQPG IQNVMILNPV GEVRFSSNSS DLYQILDPEA
MPDQVKQPSN RFMQDRQQQA VLRSYFPVPN QAPCQVCHGS LEHSPINGIV AVDFAAQAVE
HEARHKTMLL FYVALLILLL SMLFAWLAAR RVILQPLAAL SQLAQTFAMG DLQARSTLAG
QDELHQLGRT LNQMADNLQI TLRRLAEQEA YTHSILDQLP DGVRVIDGQM RTLLTNRIFR
ERLGLEEDAA EMAPCFAVSH ARTTPCPPTL VTCPVYEILD KPGQRLKSLQ THLHTDGQQE
LQVEVVASAV EILKEGKPVK VIVESVRDIK EAMAFAHGQK LAVLGQLASG IAHEVRNPLA
NIRFAIQSNL RGASITTEQL EETVALTEQA VDHCIEITER ILKLSEAPGE LSLLELNSLS
QECVALMAWN AREHSVNMQI ELSNQQPRTL AADSDLRIIL LNLMQNALHA MPHGGSLRVG
TSRGNGRVAF VVEDSGVGMD PLIQSHMFDP FFSRRADGSR GAGLGLTLVH SLVSRYNGQI
MLDSTPGKGS RFTITLTDAD TPLPLGEEV
|
|---|
| |