| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2996 |
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| Symbol | |
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| ID | 4483227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3747808 |
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| End bp | 3749088 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639723743 |
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| Product | sulfide dehydrogenase (flavocytochrome), flavoprotein subunit |
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| Protein accession | YP_866893 |
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| Protein GI | 117926276 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000190062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAC TGACACGTCG TAATTTTATT AAAACCACTG GCGCTGCTGC GGCCGTTGGT
GCTATGGGTG TCGCTGCTCC TGCCATTGCC AATAGCCACG GCAACCATGT GGTTGTTGTT
GGGGGCGGTT ATGGTGGCGC TGTTGCAGCC AAATATATTC GTATGGCCGA TCCCACCGTT
AAGGTGACTT TGATTGAGCA GAACGAATAT TACTACTCTT GCCCCTTGTC CAACCCTGTC
ATCATCGGTA TCCGTGACAT GGAAGTACAG AAGTGGGGCT ATGATGGTTT GAAAAAGCAT
GGCATTGATG TGGTAATCGA CACGGTTACG GGTATTGATG CTGGTTCTAA GACGGTCACC
ACCAAAGGTG GTAAGTTCAA ATACACCAAG TTGGTTCTTT CACCGGGTGT TGAATTTAAC
TATGCAGCCA TTCCTGGTTT GACCAAAGAA ATTGCCCATA CCAGCATGCC CCACGCATGG
AAAGCGGGTC CTCAGACCCT GTTGTTGCGT GACAAACTGG CGGCGATGAA GGATGGCGAA
CCCTTCGTCA TGGTGGCACC ACCAAACCCG TTCCGCTGCC CTCCTGGGCC TTACGAGCGG
GCCTCATTGG TGGCACACTA TCTGAAAAAG CACAAGCCTA AGTCCAAAGT GATCATTTTG
GATCCTAAAG ACAAGTTTTC CAAAATGGGC CTGTTCCGTG GCGGTTGGAA AGAGTTGGGC
TACGAGCCCA ACTATATCGA GTGGATTCCT GCTGCAGAAG GCGGTAAAGT CACTAAAGTT
GACGCTGCGA CCGGTACTGT CTACACCGAC ATGGGTGAAT ACAAGAGTTC TTGTATCAAC
ATCATCCCGC CCATGACAGC GGGATCCATT GCCGTTGCCT CTGGCCTGAC GGATAAGTCT
GGCTGGTGTC CTGTTGATCT TAAAACGTTT GAGTCTACCT TGGCCAAAGA TGTCTATGTC
ATTGGTGACT CCAGCGCCGC AGCGGGCCTG CCCAAATCTG GCTATGCCGC GAACTCCGAA
GCAAAAGTGG CGGCGGCGGC TGTGGTCGCT GCTCTTCAGG GTAAACCTGC GCCGATGCCT
TCTTATGTCA ATACATGTTA CAGCTTGTTG GCACCAGACT ACGGCATCTC TGTTGCGTTG
GTTTCGGTTT TTGAGGATGG TAAAATCACC AAAAAATCCG GCGGTCTCTC TCCTTCGACG
GCCAGCAAGG CCCACCGTAA GCAAGAGGCT TTTTATGCTG AGTCTTGGTA TCAAAGCATC
ATGGCCGATA CCTTCGCTTA A
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| Protein sequence | MSKLTRRNFI KTTGAAAAVG AMGVAAPAIA NSHGNHVVVV GGGYGGAVAA KYIRMADPTV
KVTLIEQNEY YYSCPLSNPV IIGIRDMEVQ KWGYDGLKKH GIDVVIDTVT GIDAGSKTVT
TKGGKFKYTK LVLSPGVEFN YAAIPGLTKE IAHTSMPHAW KAGPQTLLLR DKLAAMKDGE
PFVMVAPPNP FRCPPGPYER ASLVAHYLKK HKPKSKVIIL DPKDKFSKMG LFRGGWKELG
YEPNYIEWIP AAEGGKVTKV DAATGTVYTD MGEYKSSCIN IIPPMTAGSI AVASGLTDKS
GWCPVDLKTF ESTLAKDVYV IGDSSAAAGL PKSGYAANSE AKVAAAAVVA ALQGKPAPMP
SYVNTCYSLL APDYGISVAL VSVFEDGKIT KKSGGLSPST ASKAHRKQEA FYAESWYQSI
MADTFA
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