Gene Mmc1_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2955 
Symbol 
ID4482029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3667896 
End bp3670190 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content54% 
IMG OID639723702 
ProductHpt sensor hybrid histidine kinase 
Protein accessionYP_866852 
Protein GI117926235 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATTA TGCTTCTACT CACCCGCACG TTGATGGGGT CCTTGGAGTC CAATTACCTT 
TTGGCAAAAC AGAGACAAGC CAATGAAAAT AATATTGAAA TACTTCTAGC AAGCGCCACA
GAAGCACTGG AAAACCGCAA CATTATCGGT TTAAAAAAGA TTTTTGCCCA AGCCCTCCGT
AGCCAACCAC AGCTATTGGA ACTTACGATA CTCAACGACG ATGGCAAGCC GCTGTTCTCC
TCTACCCGTG AGCAGGCCCC CAACACCACC CTTACCCATT TTCGCACCCC CATTATGGTA
CAGGGCTCTT TTCAAGGGAT CTTGGTCGGG GCGTGGGATT TGGCCCCGGA TCTTCGCGCC
ATTGATACCC ATGTCAACCA TATCCTGCTA CTCACCAGCT TACTGTTTGG TCTCATCACC
CTCATGGTCA TTTTTATGGT GCATCGCCTC GCCATACAGC CGGTCGATGC CATTTATAAC
CGTTTGATTA AACAGATTTC ACCCCCACAA AGCAAACCTG AAACCTTTCA TGCAGCCAGA
GAGTTGCGCC GCCTGCACCA AACCGTAGAG AGTTTTAGCC GCACCGCCGC CAGCCATTTG
GAAAATGCCC GCACCCTGCA AGAGAGCGAG GCCCTGCTCA AACAACGGGT TGAGCGACGC
ACACGGGAGT TACGGCTGGC CAAAGAGGCC GCCGAGCAGG CCAACCTAGC CAAAACCGAA
TTTTTAGCCA CTATGAGCCA TGAGATCCGC ACCCCCCTAA ATGGTGTTTT GGGCATGTCT
GATCTGCTTT TGGAGAGCGA TCTAAACAGC TATCAACGCC ACCATGTCGA AACCATTCAC
CGTAGTGGTC GCACCCTGCT ACGGGTCATC AATGACATCC TGGATCTCTC GCGCATTCAA
GCCGGTCGCA TGCCCCTGGA GGTGACCGCA TTTAAGCTAC GGGCCTGCCT GGAAGATGTG
CAAGCCCTCT TCAAAGACCA AGCCCGCCGC AAAGGGTTAT CCTTTAGCAT CAACTGTCAG
GAGGAGCTAC CCCAACGGCT GTTGGGGGAT GCCACCCGTC TGAATCAGAT TCTCTTTAAT
CTGGTGGGGA ATGCCTTAAA ATTTACCGAG CGTGGATTTG TACGGGTTTC GGTACAGGCC
GAGCAGGTAC GAGAAGCCGA CCTGCTGCTC CGCATTCAGG TCGAAGATTC CGGCATCGGC
ATCTCCGATG AGTATAAAAA TCGCCTGTTT GAGATTTTTA GCCAGCAAGA TAGCTCCATC
TCGCGCCGCT ATGGCGGTAG TGGCCTAGGT TTGGTCATAA CCCGCAAACT GGCCCAGATC
ATGGGGGGCA AACTGGGCTT TAGCAGCCGC AGCGGTGCGG GTTCCACCTT TTGGGTAACC
GCCCGTTTTG GGCGTGTACC AGACACCCTC CCCGATCATC CGCTGCTCCC CCGAGAGGAG
CAGCAGTCTA ACCTGCTCAA TCAACGTTTT AGAGCCCACA TCCTGCTGGC GGAAGACAAT
CCCGTCAATC AAGATGTAGC CCGCCTTAAC CTAGAACGAT TGGGTTGCCG TGTCACGCTG
GTGGAAAATG GCCAACAGGC GGTGACGGTC TTTCAAGAAA ACCGCTTTGA CTTGGTGCTC
ATGGATTGTG AAATGCCGAT CATGGATGGC TATACCGCTA CCCGCACTAT ACGGGATCTT
GAACGACAAC AAGGACGCCG CGCGACCCCT ATCATTGCCG TTACCGCACA CGCCCTAGCC
AGCCATCGGA ATAAAGCCAT CGCCACGGGT ATGAATGATT TTCTAAGTAA ACCCTTTAGC
ACCACCAAGC TGATTAAATT ACTGGCCACC TATCTCCCCC CCCACACGGT CATTGCCCAA
CCTGACCCAG CCCCCCCCGT GGTAACACAA GAAACAGCCC CGTCCGCTGA CCCCGCGCAC
AAAACGCTGG ATCACCGCGC ACTGGATCAA ATTCGCGCTC TAGACCCGGC GGACCCGCAA
GGCATGCTCA ACCGCATGAT CGACCTTTAT TTTGAACAAA GCGCTAAAGA TTTCAAAGCG
ATCGAAAATG GTCTTGCAAC ACAGAATGCC GAATTGATTC GCTTTCACGC CCACAAGCTC
AAATCTTCGA GCGCGCAAAT GGGGGGGCAA CAGCTTTCCT TACTCTGCCG CACCATAGAG
GAACAGTGCC ACACCTTCAC ACGGGTGGAG GAGAGCATGA GCCAGGCAAG CAAGGCCCAA
CATGAGCTCT GTGCGGCGCT GCACGCACTG CGGCAAACAG CCCCACCTAC CCCCCCCTCT
GAGGGAGAGA TTTGA
 
Protein sequence
MLIMLLLTRT LMGSLESNYL LAKQRQANEN NIEILLASAT EALENRNIIG LKKIFAQALR 
SQPQLLELTI LNDDGKPLFS STREQAPNTT LTHFRTPIMV QGSFQGILVG AWDLAPDLRA
IDTHVNHILL LTSLLFGLIT LMVIFMVHRL AIQPVDAIYN RLIKQISPPQ SKPETFHAAR
ELRRLHQTVE SFSRTAASHL ENARTLQESE ALLKQRVERR TRELRLAKEA AEQANLAKTE
FLATMSHEIR TPLNGVLGMS DLLLESDLNS YQRHHVETIH RSGRTLLRVI NDILDLSRIQ
AGRMPLEVTA FKLRACLEDV QALFKDQARR KGLSFSINCQ EELPQRLLGD ATRLNQILFN
LVGNALKFTE RGFVRVSVQA EQVREADLLL RIQVEDSGIG ISDEYKNRLF EIFSQQDSSI
SRRYGGSGLG LVITRKLAQI MGGKLGFSSR SGAGSTFWVT ARFGRVPDTL PDHPLLPREE
QQSNLLNQRF RAHILLAEDN PVNQDVARLN LERLGCRVTL VENGQQAVTV FQENRFDLVL
MDCEMPIMDG YTATRTIRDL ERQQGRRATP IIAVTAHALA SHRNKAIATG MNDFLSKPFS
TTKLIKLLAT YLPPHTVIAQ PDPAPPVVTQ ETAPSADPAH KTLDHRALDQ IRALDPADPQ
GMLNRMIDLY FEQSAKDFKA IENGLATQNA ELIRFHAHKL KSSSAQMGGQ QLSLLCRTIE
EQCHTFTRVE ESMSQASKAQ HELCAALHAL RQTAPPTPPS EGEI