| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2946 |
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| Symbol | |
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| ID | 4482020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3649085 |
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| End bp | 3652996 |
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| Gene Length | 3912 bp |
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| Protein Length | 1303 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639723693 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_866843 |
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| Protein GI | 117926226 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCAC CACTGCGTAC TTTTATTTTT GCTCTGTTCC CGCAGTCACG TGCCGCTAAA
TTGGGCCTGC TGGCCGTGGT TGCCTTGGTG ATGATGTTAC CCGCACTCTA CCTGTTGGGA
TTGGGGGTGA ATGTTCAACA GCATATGCAG ACACTCAACC ATTTTTCCCT GGTTAAGCAG
GATATTATGC AGATGGGAGA GCGCATTATC CGCACGGATG CGCGGCTCTA TCCCCATTTT
GACCCGCTGG TGGCTGTTGT GCAGCGGCTA AAGCGGGATG TCAAACAGCT CGAAACGATG
TTGGGGGTGT ATGAGAGCCC CGGGATTGAC GAGGCGTTGA CCCCGCTTAA GCGGATGCTA
GCGCTCAATC AGGCGTATGT GGAGAATTTT AAATCCCACC GGGCTTTATT GAACAACTTT
CTCGACTATT TTCCCAATGC ATGGTCAGAG AGCTTGGCTC AATTACGGAT GCAGCAAGGC
GATGCTGTAT TACACCCACT GTTGGATGAG GTGATGGCGG CATTTATCAC CATGGCACAT
GGCACCCCAC TGCGTGATCG GGCAGGTGTT CATGCACTGC TTGAGCAAGT CATGGCCAGT
GCTTTAACGC TGGATACGAG GCAACGGCGT GGAATAATCA CCATGGTTCG CTATGCCCAG
GCTATTTTGC ACTATGAGGA TGATCTAAAA GAAATTTTGC AAGGGATTGA GCAGACCGAT
CTCAATGCGC AATTGGGTGT TTTAGAAGAG CGCTACATGC AGCTCTACAG CCAGCATCAA
CAAAAATCCA GTCACTACCG ATTGCTCCTG TTCATGGGGA CGTTGTTGCT GGCAGGGTTG
GTGGTGTGGA GCTTTTTGCG GCAGCGTCGT AATGGCTTAT CCTTAGAGGC CGCGATCAAG
CAGTTGGCGT TTCAGAAGTT TGCGATGGAT CAGCATGCCA TTGTCAGCAT TGCTGATGCC
ACCGGAAACA TTACCTACGT CAATGAAAAG TTCTGTCTGG TCAGCGGCTA CGCAGAGTCC
GAGCTGTTGG GCAACAATCA TCGTGTGCTG AGTTCGGGCC ATCATGGGGC TACGTTTTTT
CAGGAAATGT GGCACACCAT TGAACAGGGT AACGTGTGGC ATGGTGAGCT GAAAAACCGC
GCCAAGGAGG GTGGTTTTTT CTGGGTTGCA TCCACCATTG TCCCCTTTCT GGACAGTCAG
GGTAAGCCCT ACCAATATAT CTCCATACGT ACCGATATAA CCCAACGTAA ACGGGTTGAA
GAGCAGCATG AAAAACAGAA GATTTTTCTT CAGGGAATCA CCGATGCCAT GGGCGAGGGG
CTCTTTGCGG TAGACCGCGA AGGGGCTTGT ATTTTTATTA ATAAACAGGC CGAAAGGATG
CTCGGGTGGA GTGCCGAAGA GATCCACTTA AAAAAAATGC AAGGATTGAT TCACGCATCG
ACGCGGATTG CGGATGCCTA CCAATGGCCC GCCTTGCGTA GCATGGATGA AGCGGCGCCG
GCCCGTTCGG AGGATGAACA TTTTATCAAC CGTAGTGGGC AGATGTTCCC CGTTTCTATG
GTGGCTGTGC CGCTAGAGGA AGGGGAGCGC ATCGTCGGTT CGGTGGTGGT GTTTCAAGAT
ATCTCGGTTC GCAAACAGCA AGAGCAGGTA TTACAGGGTG CGGTGCGTGC GGCAGACCAA
GCCAACCGTG CTAAAAGCGA TTTTCTGGCC AATATGAGCC ATGAAATTCG CACCCCGATG
AACGCCATTC TGGGTATGAG CCATTTGGCG ATACGCACCA GCAATGATCC AAGACAGCGT
GCGTATTTGC AAAAAATCCA TGGGGCGGCT CAATCGCTGT TGCACATCAT CAACGACATT
CTCGATTTTG CCAAGGTTGA GGCCGGTAAA ATGGAGATGG AGATGGTTCC CTTCAACCTA
GATGAGGTGC TCGATACCCT CGCGACGCTA ACCTCAGTTA AAGCCGATGA GAAGGGCCTA
GCCTTAATTT TTAGGCGTCA CCTTGATCTG CCCCAACGGG TGGTGGGGGA TGCCCTGCGT
CTTAACCAGA TTTTGCTCAA CCTGACCGGC AATGCGGTTA AGTTTACCGA GCAGGGTAGC
GTGGTGGTCA ATGTAGAAAA AGTGCAGCAG CAGGGTGATC AAATCGTGCT GCGTTTCTCT
GTGCAAGATA CCGGTATCGG TATGGATGAG TCCCAAATCC AACAGCTCTT TGTCGCCTTT
GAGCAGGCGG ATAGCTCCAT TACCCGGCGC TATGGTGGGC GTGGTTTGGG TTTGGCCATC
TGTAAACAGT TGGTCAACCT GATGGCGGGT GAATTGAGTG TACAGAGCAC GCCCGAGGTT
GGCTCTTGTT TTACCTTTAC GGTACCCTTT ACGGTGGTGC AGGAGCAGGT GGTGGACGCC
ATCGTTCCCC AAGGGATACG GGGCCGTGTG GTGTTGCTGG CAGATGGTTC GGCGCTGGCG
CGGCGGGTGG TTGCCGAGAT GTTAAAACAT ATGGGTTGTG ACGTGCTAGA AGCCGAGCAG
GTGGAGCAGC TGCTAACCGC GTTGCAAGCC AAGATAGGTC CGGATATGGT GTTGCTTGAC
AGTAGCATGG TGGATGCCCA GGGCGCACAC GCTTATGCCG CCATTCGTCA GGCAGATGCA
GGGGGGGCTT GTCCCGTGTT GGTAATGCAT ACCCATGGGG ACCGAGAACA GGTTTTGGCA
TGGATGGCCA AGGATAAACA GTTGGGCCAT GTACAAAAGC CTTTAACCCC GTCGCGGTTG
CTGGAAGGGA TGGTGCAACT GTTGGTGGAT GAGGGCCGCG TAACGGGATT GAGCGGCGAG
ACCGATGTCA TCGCTCGTTA TAAGCCCTTG TTGACAGGTG CCAATATCTT GCTGGTGGAG
GATAATGGGG TTAATCAAGA GGTTGCCTTT GAGCTGCTGA GTATGGTTGG TGTCGAGGTG
ACGGTGGCCG ATAATGGCAG CCAAGCGTTA AGCTTTTTAG AGCAAGCCAG CTTTGATCTG
GTGTTAATGG ATATTCAAAT GCCTGTCATG GATGGTTATG CGGCGACCCA GGCGATCCGT
CAAAACATGT CATTAACCCT GCCCATTATT GCCATGACCG CCACTGTTAT GGAGGCCGAT
CAAGCGCGTG CGTTAGCCGT GGGCATGAAC GGTCATGTGA GCAAACCCAT AGAACCCCAT
AAGCTCTATG AAATGCTGTT ACGTTGGCTG CCCTCTAAAG GAGAGCCGTC TAGGGCCGTT
GCGCGTTTGC GTTTGCCTGG GGATGAAACG GAGCCTGACG TTACGCTGCC TGAGCAGCTA
CCTGGGATAA ACATTCCGCT GGGGGTGCAG CGGCTGGTGG GGAATAAGAG CCTCTATCTT
ACCCTTCTAC AGCGGTTTTA TCAGGACCAA AAAGAGATCA TGGTGCAGAT CCGTGAAGGA
TTGGCACGCA AAGATTTTAA CACCTGCATG ATGCAGGCAC ACACCTTAAA GGGGGTCGCT
GTGAGCCTCG GTGCCCTGCC TTTGGCCGCG TGTGCGGGCG TGCTTGAAAC AGCGTGTAAA
CAGCGCGATG AGCGGGCGAC CACCCAGGCA CTTATCCCCT TGGCGCAGAG CTTGAGTGAG
GTAATGGCAG GGCTACAACC TTTAACGGTT GAGGCACAGA CCGCTTTGCC AGAGCGGCCT
GTGGGGGGGG ATAGCCGTAC CGCCCAACTC TATTCACTGT TGCAAGCGTT GGTGGAGCCC
TTGGAGATGC GGCAACCCAA AGCGTGTCAG CCCATTGTGG CACAGTTGCA AGAAAGCTCG
TTGCCAGGGA GCTATGAGAC ACCCATTACG ATGTTGCTTA GTCATATCCA ACGTTACCGA
ATGAAAGAGG CTGAGCAGTT GGTGCAGACC CTGCTGCAAC GGTTGGCTGG AGAGTGCACG
GATGAATCAT GA
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| Protein sequence | MLSPLRTFIF ALFPQSRAAK LGLLAVVALV MMLPALYLLG LGVNVQQHMQ TLNHFSLVKQ
DIMQMGERII RTDARLYPHF DPLVAVVQRL KRDVKQLETM LGVYESPGID EALTPLKRML
ALNQAYVENF KSHRALLNNF LDYFPNAWSE SLAQLRMQQG DAVLHPLLDE VMAAFITMAH
GTPLRDRAGV HALLEQVMAS ALTLDTRQRR GIITMVRYAQ AILHYEDDLK EILQGIEQTD
LNAQLGVLEE RYMQLYSQHQ QKSSHYRLLL FMGTLLLAGL VVWSFLRQRR NGLSLEAAIK
QLAFQKFAMD QHAIVSIADA TGNITYVNEK FCLVSGYAES ELLGNNHRVL SSGHHGATFF
QEMWHTIEQG NVWHGELKNR AKEGGFFWVA STIVPFLDSQ GKPYQYISIR TDITQRKRVE
EQHEKQKIFL QGITDAMGEG LFAVDREGAC IFINKQAERM LGWSAEEIHL KKMQGLIHAS
TRIADAYQWP ALRSMDEAAP ARSEDEHFIN RSGQMFPVSM VAVPLEEGER IVGSVVVFQD
ISVRKQQEQV LQGAVRAADQ ANRAKSDFLA NMSHEIRTPM NAILGMSHLA IRTSNDPRQR
AYLQKIHGAA QSLLHIINDI LDFAKVEAGK MEMEMVPFNL DEVLDTLATL TSVKADEKGL
ALIFRRHLDL PQRVVGDALR LNQILLNLTG NAVKFTEQGS VVVNVEKVQQ QGDQIVLRFS
VQDTGIGMDE SQIQQLFVAF EQADSSITRR YGGRGLGLAI CKQLVNLMAG ELSVQSTPEV
GSCFTFTVPF TVVQEQVVDA IVPQGIRGRV VLLADGSALA RRVVAEMLKH MGCDVLEAEQ
VEQLLTALQA KIGPDMVLLD SSMVDAQGAH AYAAIRQADA GGACPVLVMH THGDREQVLA
WMAKDKQLGH VQKPLTPSRL LEGMVQLLVD EGRVTGLSGE TDVIARYKPL LTGANILLVE
DNGVNQEVAF ELLSMVGVEV TVADNGSQAL SFLEQASFDL VLMDIQMPVM DGYAATQAIR
QNMSLTLPII AMTATVMEAD QARALAVGMN GHVSKPIEPH KLYEMLLRWL PSKGEPSRAV
ARLRLPGDET EPDVTLPEQL PGINIPLGVQ RLVGNKSLYL TLLQRFYQDQ KEIMVQIREG
LARKDFNTCM MQAHTLKGVA VSLGALPLAA CAGVLETACK QRDERATTQA LIPLAQSLSE
VMAGLQPLTV EAQTALPERP VGGDSRTAQL YSLLQALVEP LEMRQPKACQ PIVAQLQESS
LPGSYETPIT MLLSHIQRYR MKEAEQLVQT LLQRLAGECT DES
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