| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2939 |
|---|
| Symbol | |
|---|
| ID | 4482843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3639133 |
|---|
| End bp | 3639768 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639723686 |
|---|
| Product | imidazole glycerol phosphate synthase subunit hisH |
|---|
| Protein accession | YP_866836 |
|---|
| Protein GI | 117926219 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTACCG TTGTTGATTA TGGATCGGGC AACCTGCGTT CGGTCTCCAA AGCGCTGGAA
AAAGTGGGGG GCAATGTGGT GGTAAGCGCC CATCCCGAAG ATGTCACCCA AGCGGATCGC
TTGGTGCTGC CTGGGGTAGG TGCCTTTGCC GACTGCCGCC GCAACCTGGA TCGCGCCCAA
CTGACCGAAC CGGTATTGGC CCACATTCGT GCGGGCAAGC CCTTTTTGGG CATCTGTGTT
GGGATGCAGA TGTTGTTTGA TGAAAGCCAT GAGTTTGGCG TGCATGAGGG TTTTGGTTTA
ATTCCCGGCA AGGTCGAGGC GTTTTCTAAA AAAATGCAGG ACCCTGCCGA TCTTAAACGC
CATCTCAAGG TACCCCACAT GGGCTGGACC CCGGTGCATC AAACGGTCGA ACACCCCATG
TGGCAGGGCA TTGAGGATAT GGCCCATTTT TATTTTGTAC ACTCGTTTCA CGGCGTGGTG
GACCACCAAG CACACCAACT GGGGCAAACC ACCTACGGCA TTCCTTTCAC CTCGGCGGTG
GGGCATGACA ACATTTTTGC CACCCAGTTT CACCCTGAAA AGAGCCAAAA CAATGGCCTC
AGGTTGCTGG AAAATTTTGT TAACTGGCAG CTATAA
|
|---|
| Protein sequence | MITVVDYGSG NLRSVSKALE KVGGNVVVSA HPEDVTQADR LVLPGVGAFA DCRRNLDRAQ
LTEPVLAHIR AGKPFLGICV GMQMLFDESH EFGVHEGFGL IPGKVEAFSK KMQDPADLKR
HLKVPHMGWT PVHQTVEHPM WQGIEDMAHF YFVHSFHGVV DHQAHQLGQT TYGIPFTSAV
GHDNIFATQF HPEKSQNNGL RLLENFVNWQ L
|
|---|
| |