Gene Mmc1_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2924 
Symbol 
ID4481976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3614725 
End bp3615519 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content53% 
IMG OID639723667 
Productputative phage repressor 
Protein accessionYP_866821 
Protein GI117926204 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA AGCTATCACC ATCGATAAAT AGTTGTCAAA TACGTTTCAC TTTGACTCAT 
CCTCAAAACT CTGACACACT GCTGCTCATG GATACCTTAG GACACAGACT GAAAGATGCT
CGGCTCGCGT TAGGCCTGTC CCAGAAAAAA CTGGCGGATA AGGCAGGCGT GAGCCAGGGC
CTCATTCATA AACTTGAGAC CGGCTTCTAT GAAGGCACCG GCCAGATTGT GCCTATTGCC
GGGGCTCTTG ATGTGCGCCC TGAGTGGCTT CACAGCGGCG AGCAACCCCG TCGTTGGGGC
AACCCCCAAT ATAAAGATCT CAGGGAAAAC AGTAGCCACT CAAGCGCAGA TGGCAGCGCG
CACTCAGGAC ACACCACATC CGAGGGGTAT GCCCTCATCC CGATCTACTC CGTGCATGCC
AGTGCAGGAC TGGGCGAAGA GGTGATTCAG GAAGATGTAC TGGACCACCT GGCGTTCCAA
ACCTCCTGGT TAAGCCAGAA GGGGCTTGAT CCCTGTAAGC TGGGTGTTAT CCAAGCCCAA
GGAGATAGCA TGTACCCCAC CTTTGATGAT GGGGATGTGC TTCTACTGGA TATGGGACAG
CGTGAGGTGG TAGATGGCAA GGTATTCGTC CTACGCTCTG AAGAGTATCT GTACGTCAAA
CGCCTTCAAA TCCTACCAGG ACGCATTCTG ATCGTTAGTG ACAACCCCAA ATACCAATCC
GTCCAGGTTA CCCGTGAAGA GCGGGAACTT TGGAAGATTG TCGGCAGAGT CGTTTGGGTC
GGGCGGGAAA TCTGA
 
Protein sequence
MAFKLSPSIN SCQIRFTLTH PQNSDTLLLM DTLGHRLKDA RLALGLSQKK LADKAGVSQG 
LIHKLETGFY EGTGQIVPIA GALDVRPEWL HSGEQPRRWG NPQYKDLREN SSHSSADGSA
HSGHTTSEGY ALIPIYSVHA SAGLGEEVIQ EDVLDHLAFQ TSWLSQKGLD PCKLGVIQAQ
GDSMYPTFDD GDVLLLDMGQ REVVDGKVFV LRSEEYLYVK RLQILPGRIL IVSDNPKYQS
VQVTREEREL WKIVGRVVWV GREI