| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2902 |
|---|
| Symbol | |
|---|
| ID | 4480798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3598246 |
|---|
| End bp | 3598923 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639723645 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866799 |
|---|
| Protein GI | 117926182 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0615892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.938531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCC AACTTACCGA AACCCAACGA ACCATTCTTA AGGCTGCTGC ACAACGCCAG
GGCGGTTCCA TTAATCCCCT ACCGAAACGC ATTCGGGGAG GAGCGCAAGG CAAGGTAATC
AACGCCCTTG AAGCCAAAGG GTTAATCGAA AACGTAAGCA ACAACCCTCC CTACCCCAAC
TGGGTCCTTA CCAGCGCCGC ATACCAGGCT ATTGGCCAGG AGCCTCCTGC CCCATCTTCT
GCCGAAAATC AGATCATCGA TGCCATGCCT GAGGAAACAG ATCTCCCGGA GGACCCTAAG
GCAGAGATCT TTAGCAAGAT CGCCCTGGAT CACCTTTTCA TCGATACGCT GGAGACCCGC
AATGCTGACA GCCTCGACTT CCACAACGTC AGCGTCTGGG GCGTCCAGAG CGCTTTGGAA
GCCGCTTATC AAGCTGGTAT TGAAACAGCT CAACGCAAAA CGCCCCGATC CAGAGGGACC
AGGGCGAATT CAAAACAGGC CAAAATGATT GAGATGATGC AGCGGCCCGG CGGAGCGACG
TTGGAGCAAC TATCTACTGA GACGGGCTGG GGATCCAACA CAATCAGAGG CTCGATTTCT
GGCATCCTAA AAAGGAAACT GGGCCTTGAT GTAACCCGTG AAAAGATCGA CGGAGTGAGC
ACCTACTTTA TCAAATGA
|
|---|
| Protein sequence | MIIQLTETQR TILKAAAQRQ GGSINPLPKR IRGGAQGKVI NALEAKGLIE NVSNNPPYPN
WVLTSAAYQA IGQEPPAPSS AENQIIDAMP EETDLPEDPK AEIFSKIALD HLFIDTLETR
NADSLDFHNV SVWGVQSALE AAYQAGIETA QRKTPRSRGT RANSKQAKMI EMMQRPGGAT
LEQLSTETGW GSNTIRGSIS GILKRKLGLD VTREKIDGVS TYFIK
|
|---|
| |