Gene Mmc1_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2715 
Symbol 
ID4483069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3431648 
End bp3433549 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content53% 
IMG OID639723460 
Producthypothetical protein 
Protein accessionYP_866614 
Protein GI117925997 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.320753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00854437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGCTA GAGAAGAGAT CGTTCCAGCT TATGGCAACC ACATCCTTTT GGGAGCTGAA 
TTTTCAGGAG GCTTTCTTGA AGGGGGGAAA TTGGAATTCC TCCCAGGTCT CAACTGCGTC
ATTGGAGGAC GCGGGACCGG CAAGACCACC ATTTTGGAGT TTATTCGTTA CACCCTGGGC
TTGATGCCTG AGCTGCAGCG CAACAGTCGC TCTCGCGCTC ACTCCGTTGT ACAGAACAAT
CTGGCCAATG GCAGAGTAAA GCTTGGAATT CAAACAGCCC ATGGTATGCG TTACACCGCT
GACCGCCCAT GGAATGATGA GTGCCAGGTT CTCAATGAGA GAGGAGAGAT CACCACCATC
TCTCTGGATC GTGACCGCAT CTTCAAAGCC GATATCTACA GCCAGAATGA GATTGAGCAG
ATCGCTACAG ATACTGGCTT TCAACTGAAG CTGATCGATC AGTTTGAAGA GGAGAGTATT
CGGCGCATCA ACGGCGATAT CAGCAAGCTG ATGCGTGATA TCAACCATAG CGCAGGTGAA
CTGCTCCAGA TCAACCGCCA GATGCAGGAT CTGGCTGAAA CCGCATCAGA GCTCGCTGCC
ATTGAAGAAA AGCTGAAGGG CTTTGAACAG CTCTCAGATG GGCCTGACGC TGAGGCCATC
AATGCCGCCC ATGCCCATAA GGCACTGCGG GATCGGGAAT CCCAATCGCT CAATGCACTC
CAGACCGAAA TCGATGCCTT CTCCTCCCGC TATCAGAAGG GAATGAGCGC ACTGATGCAA
AAACTCAATG CGCATTTCAA TCCGGAATAC CTGGAAGGGC CCAACGAGGC GGTTTTTGAA
GCAGCCTCAA GCCATGTGCA GTATATGCTC GATGAGATGA TTAAAAACCT CCCCATCATT
GAGGAGCTCT GCCAAATCGC GGGCACCGAG CTTTCTCAGC TTGATGAGGA GCTAAAGCTT
CGCCATGGAA AGCAGGAGCA GGAATACCGG GATATGGTAG AGCGATCTCA GGAAGAGCAA
GGGCGTGCTG CTGAGCGCAA CCAGATCCAA AAGCGCCATC TGGAGGTGAC AGAGGCCAGA
CGCCAGTTTG AGGAGCTCAA AAAGCAACAG GCTGAGCTGT CAGAGACGCA CCGCACTATG
ACTTCGAAGC TTTCGGATCT GCGGGATGAG CGGTTTTTGC TACGCCGAAA GGTGGCTGAC
CGTCTGACCA ACCAGCTTGA CCCCATGATA CGGGTCACCA TAACCCAGTC TGGCAATCGG
CAGGCGTTCG CGGACCTCCT CTCCGAAGGG CTCAAAGGCT CGGGGCTGAG ATACGCATCC
ATTGTGGACA AGGTGGTTCA GAATCTTTCC CCTGAAGAGG TTAGCACCAT CATCCACCGA
CGGGATGTAA AGAGGCTATC AGATGTAGCA GGTCTGGATG AGATCCGCTC CGCCCGTGTG
ATCGACCTGC TTTCTGATAA TGGCTTTGCC AATCGGCTTG AAGTAGTGGA GTTGGATGAT
TTGCCACGGA TTGAACTGCA GGATGGGGAA AAGTACAAAG ATGCCACCGC GCTTTCAACT
GGCCAGCGCT GCACCACGAT CTTGCCCATT TTGTTGCTAG AGAGCGATCG CCCCCTACTG
ATTGATCAGC CAGAGGACAA TCTGGATAAC GCCTTTATCT TCGATACCAT CGTCAAATCC
ATCAAAAAAG CCAAAGCTAC GCGCCAGCTT ATCTTTGTGA CTCATAACCC CAACATACCG
GTTCTGGGAG AGGCGGAGCG GGTCTTTGTA CTCTCATCAG ATGGTAGGCG GGGACGCATC
CAATGCGCTG GTAGCGTTGA TGAGGTAAAG GGTGAGATTG AGACACTGCT TGAAGGTGGC
CGCGAGGCGT TCCTGCAGCG CAAGGAAAGG TACGGTCACT GA
 
Protein sequence
MNAREEIVPA YGNHILLGAE FSGGFLEGGK LEFLPGLNCV IGGRGTGKTT ILEFIRYTLG 
LMPELQRNSR SRAHSVVQNN LANGRVKLGI QTAHGMRYTA DRPWNDECQV LNERGEITTI
SLDRDRIFKA DIYSQNEIEQ IATDTGFQLK LIDQFEEESI RRINGDISKL MRDINHSAGE
LLQINRQMQD LAETASELAA IEEKLKGFEQ LSDGPDAEAI NAAHAHKALR DRESQSLNAL
QTEIDAFSSR YQKGMSALMQ KLNAHFNPEY LEGPNEAVFE AASSHVQYML DEMIKNLPII
EELCQIAGTE LSQLDEELKL RHGKQEQEYR DMVERSQEEQ GRAAERNQIQ KRHLEVTEAR
RQFEELKKQQ AELSETHRTM TSKLSDLRDE RFLLRRKVAD RLTNQLDPMI RVTITQSGNR
QAFADLLSEG LKGSGLRYAS IVDKVVQNLS PEEVSTIIHR RDVKRLSDVA GLDEIRSARV
IDLLSDNGFA NRLEVVELDD LPRIELQDGE KYKDATALST GQRCTTILPI LLLESDRPLL
IDQPEDNLDN AFIFDTIVKS IKKAKATRQL IFVTHNPNIP VLGEAERVFV LSSDGRRGRI
QCAGSVDEVK GEIETLLEGG REAFLQRKER YGH