Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2715 |
Symbol | |
ID | 4483069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3431648 |
End bp | 3433549 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639723460 |
Product | hypothetical protein |
Protein accession | YP_866614 |
Protein GI | 117925997 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.320753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00854437 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGCTA GAGAAGAGAT CGTTCCAGCT TATGGCAACC ACATCCTTTT GGGAGCTGAA TTTTCAGGAG GCTTTCTTGA AGGGGGGAAA TTGGAATTCC TCCCAGGTCT CAACTGCGTC ATTGGAGGAC GCGGGACCGG CAAGACCACC ATTTTGGAGT TTATTCGTTA CACCCTGGGC TTGATGCCTG AGCTGCAGCG CAACAGTCGC TCTCGCGCTC ACTCCGTTGT ACAGAACAAT CTGGCCAATG GCAGAGTAAA GCTTGGAATT CAAACAGCCC ATGGTATGCG TTACACCGCT GACCGCCCAT GGAATGATGA GTGCCAGGTT CTCAATGAGA GAGGAGAGAT CACCACCATC TCTCTGGATC GTGACCGCAT CTTCAAAGCC GATATCTACA GCCAGAATGA GATTGAGCAG ATCGCTACAG ATACTGGCTT TCAACTGAAG CTGATCGATC AGTTTGAAGA GGAGAGTATT CGGCGCATCA ACGGCGATAT CAGCAAGCTG ATGCGTGATA TCAACCATAG CGCAGGTGAA CTGCTCCAGA TCAACCGCCA GATGCAGGAT CTGGCTGAAA CCGCATCAGA GCTCGCTGCC ATTGAAGAAA AGCTGAAGGG CTTTGAACAG CTCTCAGATG GGCCTGACGC TGAGGCCATC AATGCCGCCC ATGCCCATAA GGCACTGCGG GATCGGGAAT CCCAATCGCT CAATGCACTC CAGACCGAAA TCGATGCCTT CTCCTCCCGC TATCAGAAGG GAATGAGCGC ACTGATGCAA AAACTCAATG CGCATTTCAA TCCGGAATAC CTGGAAGGGC CCAACGAGGC GGTTTTTGAA GCAGCCTCAA GCCATGTGCA GTATATGCTC GATGAGATGA TTAAAAACCT CCCCATCATT GAGGAGCTCT GCCAAATCGC GGGCACCGAG CTTTCTCAGC TTGATGAGGA GCTAAAGCTT CGCCATGGAA AGCAGGAGCA GGAATACCGG GATATGGTAG AGCGATCTCA GGAAGAGCAA GGGCGTGCTG CTGAGCGCAA CCAGATCCAA AAGCGCCATC TGGAGGTGAC AGAGGCCAGA CGCCAGTTTG AGGAGCTCAA AAAGCAACAG GCTGAGCTGT CAGAGACGCA CCGCACTATG ACTTCGAAGC TTTCGGATCT GCGGGATGAG CGGTTTTTGC TACGCCGAAA GGTGGCTGAC CGTCTGACCA ACCAGCTTGA CCCCATGATA CGGGTCACCA TAACCCAGTC TGGCAATCGG CAGGCGTTCG CGGACCTCCT CTCCGAAGGG CTCAAAGGCT CGGGGCTGAG ATACGCATCC ATTGTGGACA AGGTGGTTCA GAATCTTTCC CCTGAAGAGG TTAGCACCAT CATCCACCGA CGGGATGTAA AGAGGCTATC AGATGTAGCA GGTCTGGATG AGATCCGCTC CGCCCGTGTG ATCGACCTGC TTTCTGATAA TGGCTTTGCC AATCGGCTTG AAGTAGTGGA GTTGGATGAT TTGCCACGGA TTGAACTGCA GGATGGGGAA AAGTACAAAG ATGCCACCGC GCTTTCAACT GGCCAGCGCT GCACCACGAT CTTGCCCATT TTGTTGCTAG AGAGCGATCG CCCCCTACTG ATTGATCAGC CAGAGGACAA TCTGGATAAC GCCTTTATCT TCGATACCAT CGTCAAATCC ATCAAAAAAG CCAAAGCTAC GCGCCAGCTT ATCTTTGTGA CTCATAACCC CAACATACCG GTTCTGGGAG AGGCGGAGCG GGTCTTTGTA CTCTCATCAG ATGGTAGGCG GGGACGCATC CAATGCGCTG GTAGCGTTGA TGAGGTAAAG GGTGAGATTG AGACACTGCT TGAAGGTGGC CGCGAGGCGT TCCTGCAGCG CAAGGAAAGG TACGGTCACT GA
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Protein sequence | MNAREEIVPA YGNHILLGAE FSGGFLEGGK LEFLPGLNCV IGGRGTGKTT ILEFIRYTLG LMPELQRNSR SRAHSVVQNN LANGRVKLGI QTAHGMRYTA DRPWNDECQV LNERGEITTI SLDRDRIFKA DIYSQNEIEQ IATDTGFQLK LIDQFEEESI RRINGDISKL MRDINHSAGE LLQINRQMQD LAETASELAA IEEKLKGFEQ LSDGPDAEAI NAAHAHKALR DRESQSLNAL QTEIDAFSSR YQKGMSALMQ KLNAHFNPEY LEGPNEAVFE AASSHVQYML DEMIKNLPII EELCQIAGTE LSQLDEELKL RHGKQEQEYR DMVERSQEEQ GRAAERNQIQ KRHLEVTEAR RQFEELKKQQ AELSETHRTM TSKLSDLRDE RFLLRRKVAD RLTNQLDPMI RVTITQSGNR QAFADLLSEG LKGSGLRYAS IVDKVVQNLS PEEVSTIIHR RDVKRLSDVA GLDEIRSARV IDLLSDNGFA NRLEVVELDD LPRIELQDGE KYKDATALST GQRCTTILPI LLLESDRPLL IDQPEDNLDN AFIFDTIVKS IKKAKATRQL IFVTHNPNIP VLGEAERVFV LSSDGRRGRI QCAGSVDEVK GEIETLLEGG REAFLQRKER YGH
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