Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2706 |
Symbol | |
ID | 4483060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3422194 |
End bp | 3422739 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639723451 |
Product | integrase |
Protein accession | YP_866605 |
Protein GI | 117925988 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0154692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTAC CCGACGACAT CTTCACCCTG ACCGGTGTGA AGACCGCATA TGTGCTATTT TTCATCCACC TGGAAAGCCG CCGGGTGTTC TGCAGTTCGC CATCCTATTC GCCGGACAGC GCCTGGGTGA CGCAGCAGGC CCGGAACATG CTGATGTGGT GCGATGACGA GGGCATCAGC CCCGAATTCC TGATCCGTGA CGCCGACACC AAGTTCACTG CCTCCTTCAA TGAGGTATGG CAATCCGAGG GAGCTCGGGT GATCCAAATC CCGCCAAAAT CACCCCAGGC GAACGCATTC GCGGAGTCCT GGATAGCCAG CTTCAAGCGG GAGTGTCTGG AGTTCTTTAT CTGTGTCAGC CGCCGACAGC TGGACTACAT CTGCCGCCGA TGGGTGTATC ATCACAACAC CGATCGTCCT CACCAGGGTG TTGATATCGG CAACAACGTG CTACAGGTGA ATTTCAAGCC GACTCAAACG GGTGATGTCC GGTGCCGGGA GGATCTTGGA GGGATTATCC GATCCTACTA CCGGGAGGCT GCCTGA
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Protein sequence | MSLPDDIFTL TGVKTAYVLF FIHLESRRVF CSSPSYSPDS AWVTQQARNM LMWCDDEGIS PEFLIRDADT KFTASFNEVW QSEGARVIQI PPKSPQANAF AESWIASFKR ECLEFFICVS RRQLDYICRR WVYHHNTDRP HQGVDIGNNV LQVNFKPTQT GDVRCREDLG GIIRSYYREA A
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