Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2693 |
Symbol | |
ID | 4482545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3396341 |
End bp | 3398689 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639723440 |
Product | histidine kinase |
Protein accession | YP_866594 |
Protein GI | 117925977 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.145264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.474998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATTG AGGCCATCTC CGATGAAGGA GCCCCCGTAG GTATCACCCC ATTAATCGCC CGCAAGCTTT CCCAACTATT GGGGATCGAC ATCCATTTTC AATCCACACC GGATTGGGAA ACCTGCATCA ACAAACTGCG CGCCGGGGAG ATTGATCTGC TTTTGATTGC CGGTCAATCC GCCAAACGTC GTCAATTTTT GAATTTCAGC CACAGTTACT ATACCTTTTC CCCGGTTATT GCCACCCTGC GCAACACACC TTACCTACAG CATATTGAAG AGATTGGAGA TCGGACGATT GGGGTGATCC GCAATACAGC CACCGAATCC CGTTTGCGCG ATAACTACCC ATCCATTCAC CTGAAAACAT TTAATAATTT GGATGAGGGG TTGGACGCCG TGGAAAAAGG TCAACTGTTT GGCTTTTCCA GCGTCTCTTA TGCCATCAGC TACTCCCTGG TCAAAGAGCA GCGCCATACC CTTCAGATCT CAGGTCGTTT TGATTTGGAG CAGCCTATCC ATATCGCCTT GAGCAGGCGT CATACTGCGC TAACACCACT GTTCAACAAG GCCATAGACT ATTTTCCCAT GAGCGAGAGA GCGGTTATTT TCTCCCGCTG GATCGACGCC ATCCCGCAAC CTTTAGTAGA TCCAATCATC CTGATTCGCA CCGCCGCTGT ACTGGCCATT TTGCTTATTT TTGCCATTGG CTGGAACCGC ATCCGCATAT TGAAAGCCCA ACAGGCACAA AAGCAGGTTG AGCATGAGTT GGATCTCAGC CGGGTCGCAG CCCAGGCCAA AAACACCTTT TTTGCCCAGG TCAGCCATGA GATTCGTGGC CCTTTGAACG CCATCCTTGG TTATGTCGTC ATGCTCCGCC AAACGGAGTT AAAGGCTCAA CAGCTCCATT TATTGGAACA TTTAGGCAGC GCCTCCCACG CCCTGCTCAC CCTGCTCAAT GACATTCTGG ATTACAGCAG AATGGAGGCT CAAAAGCTGA CTCTGGCCCC CCAGCCTACC CATCTACCAA CCTTACTCAA GCGCATGGAA GAGAGCTTTG CGCCCAGGAT AGCGAAGAAG GGACTGCACT TTTCTTTAAG CATGGCGAAA GATCTTCCCG CCTGGGCCAA TCTGGACCCG GTGCGCATGG AACAGGTCAT CACCAACCTG CTGGACAACG CTTACAAATT TACCCTCCAG GGGCATATCA CGCTGGAAGC TCGGCTGGAG AGCGATGCAT CCACGCCGCC CAGGCTGACC ATCATCGTCA GCGACAGCGG CATTGGCATG GACACCAGCC AAGAGCAGAG TCTGTTTGAA GCCTTTAATC AAGCGGATCC AAGCATCGCC CGCAGCTATG GGGGCAGCGG CCTGGGCTTG GCAATCTGCC GCCATATTTT GTCCTTGATG GAAGGGGATA TCGCCATGGA AAGCACCCCC AACCAAGGCA GCCGTTTTAC CCTGCGCATC CCCTATTGCC CGGTCTCTGA AACAGAGATT GACACCCTTC ACACCTCGCC AGCCGTTGCA CAAGCGCCGA AGGAGCCACG TCACCCCCTT GCTACCCATC ATAGTGGTTG TCACATCTTG CTGGTGGAGG ATAATCCACT CAACACCCAT GTTCTCCAAC TGTTCTTTGA GGAGGCTGGT TTGGTGGTCT GGCATGCCGA AAACGGACAG AGCGCCCTGG ATCAGTTGGC TCAGCACCCG GTGGATCTGG TTATGATGGA TGTGGAGATG CCTGTTATGG ATGGCCTCTC CTGCACCCGT CGCTTGCGCC GCAACTATCC AACGCTACCT GTGATCGGCA TGACCGCACA TTCTGACGCT GGGATACGCC AAGCCTGCCT GGAGATTGGT ATGAATGAAC TGATCTTCAA ACCTATGGAT TGGGCTCAAC TGTTTGAGCT GTTGCATCAC TGGCTGCCCA CCACCACTTC GCCTCGCCCT ACTATACCAT TACAACCACC CACCCCTGAT GCCGCTTCCA CCAAAAAGCT TCCGGCTTTG GAGGGCATTG ATGTGACCAT CGGTCTACAA CGGGTGGTTG GTCGCGAAAC GCTCTATCTT CACCTGCTGG AAACCTTTGC AAAAGATCAT CAGCAAACCC AATCCCTTTT GCGATCCGCC CTGCTAAACA GCGATCATGT TGGGTTCAGA AGCCAACTGC ATGGCCTCAA AACATCTGCT GACTACATTG GGGCCATACC CTTGGCCCAT CAAGCAGAAA CGCTTTATCA ACTGTTGGGA AAAACCTGGA ATGGATCCTC TAAAATTGAG GCCAACACCT TGATTGGGAA TTTGGAAAAA CTCCTGGAAG GCCTGCGAGG ATGGCAGCAG GCTCAGTAA
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Protein sequence | MPIEAISDEG APVGITPLIA RKLSQLLGID IHFQSTPDWE TCINKLRAGE IDLLLIAGQS AKRRQFLNFS HSYYTFSPVI ATLRNTPYLQ HIEEIGDRTI GVIRNTATES RLRDNYPSIH LKTFNNLDEG LDAVEKGQLF GFSSVSYAIS YSLVKEQRHT LQISGRFDLE QPIHIALSRR HTALTPLFNK AIDYFPMSER AVIFSRWIDA IPQPLVDPII LIRTAAVLAI LLIFAIGWNR IRILKAQQAQ KQVEHELDLS RVAAQAKNTF FAQVSHEIRG PLNAILGYVV MLRQTELKAQ QLHLLEHLGS ASHALLTLLN DILDYSRMEA QKLTLAPQPT HLPTLLKRME ESFAPRIAKK GLHFSLSMAK DLPAWANLDP VRMEQVITNL LDNAYKFTLQ GHITLEARLE SDASTPPRLT IIVSDSGIGM DTSQEQSLFE AFNQADPSIA RSYGGSGLGL AICRHILSLM EGDIAMESTP NQGSRFTLRI PYCPVSETEI DTLHTSPAVA QAPKEPRHPL ATHHSGCHIL LVEDNPLNTH VLQLFFEEAG LVVWHAENGQ SALDQLAQHP VDLVMMDVEM PVMDGLSCTR RLRRNYPTLP VIGMTAHSDA GIRQACLEIG MNELIFKPMD WAQLFELLHH WLPTTTSPRP TIPLQPPTPD AASTKKLPAL EGIDVTIGLQ RVVGRETLYL HLLETFAKDH QQTQSLLRSA LLNSDHVGFR SQLHGLKTSA DYIGAIPLAH QAETLYQLLG KTWNGSSKIE ANTLIGNLEK LLEGLRGWQQ AQ
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