Gene Mmc1_2681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2681 
Symbol 
ID4482533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3384270 
End bp3384929 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content55% 
IMG OID639723429 
Producthypothetical protein 
Protein accessionYP_866583 
Protein GI117925966 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0401595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.577134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGAAGC GATTTCGAGT TCGACTAAGA CAAAATTTTC TTGCGGGTCT GCTGCTGGTT 
CTGCCCGTTG GGGTGACGCT GTTTATTCTA CATCTCATGG TTGCCAGTAG CGATCTGCTG
CTCAGTTGGT TGCCGGAACG GTTGCAACCC GATCAACTGC TGGGCTTTCA CCTGCCTGGG
CTGGATCTGT TGCTCACGCT GCTCATGATT TTACTGGTGG GGAGCGCAGC GCGTCACTGG
GTGGGACGCT GGTTGGTGCA GTGGAGTGAG CGCTTATTCG GGGCTATCCC CTTGGTGCGC
AATCTGCACC ACGCCGTCAA ACAGTTTGTG GGTACGCTAT TGGGACGCCG CGCCAAAAGC
TTTAAACAGG TGGTATTGTT GGAGTACCCT CGCCCAGGGC TGTTTGCCAT TGGCTTGGTC
ACGGCCCAGG GACGGGAGGA GATTCTTGAA GTGATGGGGG AGCCGCTCTA CCACGTGTTT
GTGCCAACCA CGCCCAACCC GACCAGCGGC ATGCTCCTGT TTGTGCCAAA AAAAGAGGTA
ATTGAGCTGA ATATGAGTGT GGAGGAAGGG CTTAAATTGG TTATTTCCGG TGGTCTGGTT
ATCCCGAGCA GAAATGCGGC CAGTACCGTT CCCACCCGTC AGGGCGACCG CTCATGTTGA
 
Protein sequence
MLKRFRVRLR QNFLAGLLLV LPVGVTLFIL HLMVASSDLL LSWLPERLQP DQLLGFHLPG 
LDLLLTLLMI LLVGSAARHW VGRWLVQWSE RLFGAIPLVR NLHHAVKQFV GTLLGRRAKS
FKQVVLLEYP RPGLFAIGLV TAQGREEILE VMGEPLYHVF VPTTPNPTSG MLLFVPKKEV
IELNMSVEEG LKLVISGGLV IPSRNAASTV PTRQGDRSC