Gene Mmc1_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2675 
Symbol 
ID4480476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3378072 
End bp3378545 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content53% 
IMG OID639723423 
ProductDNA polymerase III, chi subunit 
Protein accessionYP_866577 
Protein GI117925960 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000802789 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA CTCAGCAAGA CCCGCTTCGC GTGCGCTTTT ATCAACTTGC CACGGATAGC 
CGCGAGCGGG CTTTGCTGAA AATTTTAAAT AAGGTTTACG GTATGGGCCT GCGGGTCTGT
ATTGTGGTGG AGGATCGCCA GCAGGCTCAA GGGTTGGACG AACACTTATG GCGCCATCCT
CCAGATAGCT TTTTACCCCA TGCAACCAGC GTAGATCCCT TTCCCGAAGC GCAGCCTATC
CTGATTAGCG AGCAGCCAGT CGATCCCAAT GGTGCCACCG TCGTGGTTAT GCTGACCCCC
GTTCCGTTGG AGAATTTGGA TCAATTTGAC ACCGTTGTGG ATTTTGTGCC AGACGATCCA
CAAGCCAAAC GGGCCAGCCG CCTACGCTAC AAACACTATA AAGATGCCCA GTGCCAGATG
GAGTATTGGA TTCAAACCCC AAAAGGGCAG TGGGAACGCG CGGCGGCATC ATAG
 
Protein sequence
MAKTQQDPLR VRFYQLATDS RERALLKILN KVYGMGLRVC IVVEDRQQAQ GLDEHLWRHP 
PDSFLPHATS VDPFPEAQPI LISEQPVDPN GATVVVMLTP VPLENLDQFD TVVDFVPDDP
QAKRASRLRY KHYKDAQCQM EYWIQTPKGQ WERAAAS