| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2647 |
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| Symbol | |
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| ID | 4482920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3346109 |
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| End bp | 3347302 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639723391 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_866549 |
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| Protein GI | 117925932 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.154433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAGT ACAACTGGTT TAAGCGAGGA CTGGCAGCCC TGTGCTTTGC CTTTTTTGCT
GGCATTGGGG GCGTGTCGGC AATGGAATCA GTGCGTATTG GCTTCGACGG TGCGTATGGA
CTCAAAAACA GTACCTCTGC CCAATCCATT GAAATGGGTT TACGCTTAGC CATTGATGAG
ATTAACACTG CGGGCGGCGT TCTGGGCGGG AGGCCCTTGG CCTTGGTAAC TGCTGACAAC
CGCTCGGTAC CTGCACGTGG CATCGAAAAC CTAAAAAAAT TTGCTGCTGA TCCCAACTTG
GTGGCAGTAG TAGGCGGGCG TTTTAGTCCA GTACTTCTGC AACAACTCGA ACTAGTACAT
CATCTGCCAA TCCCCCTGCT GGACGCCTGG GGCTCGGCTG ATGGTATCAC TGACCATGCG
CAATCGCCCA GTTACAGCTT CCGTATTTCC TTACGCGACA AGTATGCCAT GCCAATAATG
CTACAATACG CTGCCAGTAA AGGTTCCGAT AAGGTCGCCT TGCTGGTGCC CAACACTGGT
TGGGGACGTA GCAATACCAA TGCAGCTGAA CGCTACATTA AAAAGCACCC GGAAACCCAG
ATTACGCTCA TCCACTGGTA CAACTGGGGA GAGAAGGACT TCTCTGCCGC TTATCAGGCC
GTATTGGACT CTGGAGCGCA GGCACTGGTG ATGGTAGCCA ACGATTTGGA AGGATCGATC
ATAGTTCGCC ATGTGTCCTC GCGCCCACAG GCAGAACGCC TGCCTATAAT CAGTCACTGG
GGCGTGACAG GAGGGGCCTT TGTGGAAGCG TGTGGCCCAG CCTTGCAAGC CGTGGATTTT
TCTGTGGTGC AGACTTTCAG CATGCTGCGC TCCCAGGGGC CGGCCTTAAC TCGTGTGGTG
ACCTTGCTAC ACGACAAGTT GGGTATCAAA GACCCTGCTA AGATGGATTC GCCAGTCGGG
TTTGCCCACG CTTATGATCT GGTGCACATT CTGGCTCGAG CTATCAATTT GGCTGGAAGT
ATTGATCGGG TGGCTGTAAG AGATGCCTTG GAACAGGTAC GCGACTACGC TGGTTTGGTG
CGTAACTATG ACCACCCATT TCCTGCAGAG GATCATAATG GTCTTAAATT AGAGGATGTG
TTTATGGCGC GCTTCCAGGG CAATACCATA GTACCCATCA CCTCTGCGCA TTAA
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| Protein sequence | MVKYNWFKRG LAALCFAFFA GIGGVSAMES VRIGFDGAYG LKNSTSAQSI EMGLRLAIDE
INTAGGVLGG RPLALVTADN RSVPARGIEN LKKFAADPNL VAVVGGRFSP VLLQQLELVH
HLPIPLLDAW GSADGITDHA QSPSYSFRIS LRDKYAMPIM LQYAASKGSD KVALLVPNTG
WGRSNTNAAE RYIKKHPETQ ITLIHWYNWG EKDFSAAYQA VLDSGAQALV MVANDLEGSI
IVRHVSSRPQ AERLPIISHW GVTGGAFVEA CGPALQAVDF SVVQTFSMLR SQGPALTRVV
TLLHDKLGIK DPAKMDSPVG FAHAYDLVHI LARAINLAGS IDRVAVRDAL EQVRDYAGLV
RNYDHPFPAE DHNGLKLEDV FMARFQGNTI VPITSAH
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