Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2644 |
Symbol | |
ID | 4482917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3343854 |
End bp | 3344723 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639723388 |
Product | integrase catalytic subunit |
Protein accession | YP_866546 |
Protein GI | 117925929 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0116112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGTACG CCTTTATTCA AGCTCATAGC AAAAGCTACT CTGTCGAGTC TTTATGCCGT GTTCTGGATG TTTCTCGTCG TGGATATTAT GGCTGGCTTA ATCGAGCCAG CACGAGTAAG GCTGAAGAGA ATCAACTGCT TGAAGAGTGG ATAGCAGAGA TTTTCAAGGT GAGTCGATCA ATCTATGGAA CACGGCGTAT ACGCAAAGAG TTAAATGAGC ATGGTGTACG AGTGAGTCGC CGACGCGTCT CCAGAATCAA GAGGAAGCTT GGCTTGGTTT GTAAAGCTCA GAAGCGTTAT AAGGTTGTAA CGACAGATTC AAATCACGCA CTGCCTATAG CGCCTAACCT TCTTGATCGT CAATTCGATA CGGAACGCCC TGATAACGCC TATGTTGGTG ACATTACATA TATTCCGACC AAGGGGGGTT GGCTCTATCT AGCTGTTTGG ATTGACCTTT ATTCCAGAGC TGTTGTCGGT TGGTCTATGG CAGACCATAT GAAAGCAGAA CTGGTAACAG ACGCTTTACG CATGGCCTTT TTCAAGCGCC GCCCAGAGGC CGGTCTGATT GTTCACAGTG ATCGTGGTAG CCAATATGCG TCTGAACTCT TTAGAAAATA TCTGGATAAG AGAGGCTATA CACAGAGTAT GAGTCGTCGT GGCAACTGTT GGGACAACGC ACCAGCAGAA AGCTTTTTCC ACACTCTCAA AGTTGAGCTC GTGTCATCCT GTGACTTCAA GACGCGAGAT GAGGCTAAAC AGGCAATCTT TGAATATATA GAGGCTTTTT ATAACCGAAA GCGCAAGCAT TCATCCATCG GCTATATGAG TCCTTCTCAG TACGAAACAG AGTGGCTCAA GTCCGCGTAA
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Protein sequence | MRYAFIQAHS KSYSVESLCR VLDVSRRGYY GWLNRASTSK AEENQLLEEW IAEIFKVSRS IYGTRRIRKE LNEHGVRVSR RRVSRIKRKL GLVCKAQKRY KVVTTDSNHA LPIAPNLLDR QFDTERPDNA YVGDITYIPT KGGWLYLAVW IDLYSRAVVG WSMADHMKAE LVTDALRMAF FKRRPEAGLI VHSDRGSQYA SELFRKYLDK RGYTQSMSRR GNCWDNAPAE SFFHTLKVEL VSSCDFKTRD EAKQAIFEYI EAFYNRKRKH SSIGYMSPSQ YETEWLKSA
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