| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2601 |
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| Symbol | |
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| ID | 4482226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3299888 |
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| End bp | 3302026 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639723345 |
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| Product | TOPRIM domain-containing protein |
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| Protein accession | YP_866503 |
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| Protein GI | 117925886 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATG GGGCTTCATA TCTCGATTTC AATGATGCCG GTGGACAGCA GGAGTTTTCC
TCTGTTGCGG AGCAGCATCA TGAAAAGGAG GAGATAAAAG CACGCCTGCA GAGCCAGATT
GAGTTAGTGC TTTATCACCT GTTGCCTGCC GGGAAGGTTC GTCATGGGCA GTTCTTCATC
GGAGATGTGG AGGGCAACCC CGGTGAGAGC ATGAAGGTTG AGCTGACGGG AGAAAAGGCC
GGGGTCTGGT ATGACCATGC CGCAGGTTCG GGTGGCGATA TCTTGGAGTT GTGGGCCCGG
TCACGAGGCA TGGACACCCG CACCCAGTTC CGTGACGTCA TGGATGATGT GCGCGACTGG
CTGGGAGAGT CCGTGAGATT GCCACCTGTA TCGATGCAAC CCACTCAACG GCGTGAACCC
CCCATGGATA AGTTGGGGCC CCATACCGGT AAGTGGGACT ATTTCGATAC CAATGGCCAA
CTACTGGTCT GTGTCTACCG TTACGATCCT CCGGGCCGCC GAAAGGAGTT TCGGCCCCTG
GATGTGCGCA CTGGCAAGTG GCAGTCGCCA GCGGTGACGC CCCTCTACAA CCTCCCCGGC
ATCATTCACG CCGCTGAGGT GGTGTTGGTC GAAGGGGAAA AGAGCGCCCA GGCGCTCATC
GATGCGGGAA TCCCGGCTAC CACCTCCTTG GGCTCCAAGG GACAGATCAA CCGTGCCGAT
TGGAGTGTTC TCCAGGGTAG GCGGGTAATC ATCTGGCCCG ACCGGGACAA GGCAGGATGG
GAGTACGCCC AATTGGCATC ACAAGCCGTT AAGGGTGCTG GAGCCCATGA AGTGTCCATT
CTCACACCAC CAGAGGGAAA ACCGGAAAAG TGGGACGCCG CTGATGCCGT GGCCGAAGGG
ATGGATGTGC GTGCTTTCAT CCATGGAACA CCACGGCAGG AACCACAGAC CCGGAAACGC
CGCATTCGAC TGATGGATTG GACCTTCGAC CGTTATGACG GCCCACCCCC GCCACGGGAG
TGGTTGGTTG AGGGTGTTCT TCCCCTCGGA GTGCCCGGCA TGGTCGCCGC CATCGGTGGA
GCAGGAAAAA GCATGCTGTT GTTGGACCTT TGCATCAAGG TGGCTCAGAT ACATACAGGG
AATCCCATTC CCACAGAGGC GCTGGGAGGT CCTTTGGTCC CTATTGAAGG TACAGCGGTC
ATGCTCACCG CTGAGGACGA TCAAGATGAG ATCCACAGAC GACTCAATCT GCTTGTTGGA
GATCTTCCAG ATCCCAGAAG GCTGATTGTG ATTCCACTGC CCAATGCAGG TGGTGCTATG
CCCCTTGTCG CCATGGGTCG TGAAGGCCCT GTACTCACTG ATGCCTACGA GGAGATGCGT
CAGGAGCTAT TGGAAATCCC AGACCTGCGA TTAGTGGTCA TCGATCCACT CCAAAGCTTT
GCAGGCGGAG ATGTCAATAG TGACCCCGCC GCAGGGTCCA TGTTCTTTGC TGGGTTGGGC
CGCATTGCTG CTGAAACAGG GGCAACCACA TTAGTAGCGC ACCATTTCAA GAAAGTGGGT
AGCAAACCCA TTCACAGCGC CAGTGAAGCC AGAGAAGCAA TCCGTGGCAC CACTGCCCTA
GTTGACGGTG GGCGCTGGTC TTACGCCCTA TGGGAAGCCT CACAGGATGA ATCCATCAAG
ATCTGCACCC AATTGCAACG CAGTTATGAA CGTGACTCTG TGTTCAATGG TGCGGTGGTC
AAAAGCAACT GGCCAGTTGA TAAAGCAGTT AGGGTCTATG TTCGCGAATC ATCGACAGGG
TTACTACAAG ATCGTTCAGT TGACCTCGCT ATGCGCATCA GTGGCAATGA AGATTTAAGT
AAAAGTCTTG TCATGGCTCT GGGTAAAGCA GCATCCAATG GCCAACCATT CACGAAAACT
GGCGGCAATG GTGTCTTTGA ACGCAGATCA GAGCTTCCAG GCGACTTACA GGCGTTTTCC
AAGCATAAGA TAGCAGAGTT GATTGACTCC TTATTGCGAA CAGGACGGCT AGTGCAGTGC
GTAGCACCGG GTAGTCATAT CAAAAAATGG CTCGATGTTC CGGGGGGTGA GTTTGCACTT
GGCGTCGGTG AATTTCAGCT GGGATCTGGA GCTGAATGA
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| Protein sequence | MNNGASYLDF NDAGGQQEFS SVAEQHHEKE EIKARLQSQI ELVLYHLLPA GKVRHGQFFI
GDVEGNPGES MKVELTGEKA GVWYDHAAGS GGDILELWAR SRGMDTRTQF RDVMDDVRDW
LGESVRLPPV SMQPTQRREP PMDKLGPHTG KWDYFDTNGQ LLVCVYRYDP PGRRKEFRPL
DVRTGKWQSP AVTPLYNLPG IIHAAEVVLV EGEKSAQALI DAGIPATTSL GSKGQINRAD
WSVLQGRRVI IWPDRDKAGW EYAQLASQAV KGAGAHEVSI LTPPEGKPEK WDAADAVAEG
MDVRAFIHGT PRQEPQTRKR RIRLMDWTFD RYDGPPPPRE WLVEGVLPLG VPGMVAAIGG
AGKSMLLLDL CIKVAQIHTG NPIPTEALGG PLVPIEGTAV MLTAEDDQDE IHRRLNLLVG
DLPDPRRLIV IPLPNAGGAM PLVAMGREGP VLTDAYEEMR QELLEIPDLR LVVIDPLQSF
AGGDVNSDPA AGSMFFAGLG RIAAETGATT LVAHHFKKVG SKPIHSASEA REAIRGTTAL
VDGGRWSYAL WEASQDESIK ICTQLQRSYE RDSVFNGAVV KSNWPVDKAV RVYVRESSTG
LLQDRSVDLA MRISGNEDLS KSLVMALGKA ASNGQPFTKT GGNGVFERRS ELPGDLQAFS
KHKIAELIDS LLRTGRLVQC VAPGSHIKKW LDVPGGEFAL GVGEFQLGSG AE
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