Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2574 |
Symbol | |
ID | 4483547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3277699 |
End bp | 3278955 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639723321 |
Product | serine peptidase |
Protein accession | YP_866479 |
Protein GI | 117925862 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.195998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGATC GCGCCCGCTT GGAGACCATC CTCTCGGTGA TCGGTCCCCG CGTCGGCCTG GAACCAACGG CCATGCCCAG CGGCTTTGAG CCCAAAAATT ACAGCTCTGA TTTGATGGTC ACGCCTAATG GAATCGCCAT CGTGCCCATC CACGGCACCC TGGTGAAACG GGTGGGGGCC GTCGAGGCTG CTTCGGGGCT CATGTCCTAC GCATCCATTG AAGAAAAACT GCTGGATGCC GCCACCGACC CAGCCGTGCG AGCAATCCTA ATGGATATCG ACTCCCCTGG TGGTGAGGTT GGGGGCGTGT TCGATCTGGC CGACATGATC AGTGAAGCGG GGCAGGGCAA GCCCATCTGG GCGCTGGCCG ATGACGCTTT CTCTGCTGCC TATCTTATCG CCTCCCAGGC TCATCGGATC ATCGTGCCCC AGACTGCGGG GGTGGGCTCC ATCGGCGTCA TAGCTGTTCA TGTGGATGAG TCGGAGAAGG ATGCCAAAGA GGGGCGTAGC TACACCACGG TGTTTGCCGG AGCCCGGAAA AATGACTTTT CCACCCACGC CCCTCTCTCT CTAGAGGCCC GGACTAACCT GCAACTGGAG GTAGATCGGC TCTACGGTAT GTTCGTCGCC GCCGTGGCGG CAGGTCGCAA GATGCATGAA TCGGCGGTGC GTGCCACCGA GGCAGGCCTG TTCTTTGGCG ACAAGGCAAT CCGGGTTGGT CTGGCTGACC AGGTTGGCAC CATCCGGGAT GCCCTGGCTG GCCTGTCAAT AACTATTGAT GCGTCCAAAA AGACCCATTC TCACCGAGCG GCACTGCCGC GGGAACCTGT GTATATGGAG GAAACCATGC CCATGGAAGA AAATCCGGCG GCTGAAACAT CTGTTGTCAC GTCACGACAA TCCCAACCTG ACCTTCACGC CAAATCCGAC ATAATGTCGG ATTTGACTGA CCAATCTGCG GTATCCAACG TTGTGGACCT AGACAAGGTC CGTGCCGAGC ATGGCCAACA GATGCGCAAT GAGGCTCAGG CCATTGTCGA TCTGTGTGCT CTTGCTGGGA TGCCTGATCT GGCTGGCGGT TATATCGCCG AAGGCCAATC TGCCGAAGCG GTGCGCAAAG AGCTACTGGC CAAACGGGCC GATGCTGAGG AGATCCACTC CGAGGTGATG CCTGGTGATG GCACCCGTAT GCAGCCCAGA CAGAGTCTTG AAACCAACCC GGTTGTGGCC TCCTGCCGCA AACTCGCCGG TCAATAA
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Protein sequence | MVDRARLETI LSVIGPRVGL EPTAMPSGFE PKNYSSDLMV TPNGIAIVPI HGTLVKRVGA VEAASGLMSY ASIEEKLLDA ATDPAVRAIL MDIDSPGGEV GGVFDLADMI SEAGQGKPIW ALADDAFSAA YLIASQAHRI IVPQTAGVGS IGVIAVHVDE SEKDAKEGRS YTTVFAGARK NDFSTHAPLS LEARTNLQLE VDRLYGMFVA AVAAGRKMHE SAVRATEAGL FFGDKAIRVG LADQVGTIRD ALAGLSITID ASKKTHSHRA ALPREPVYME ETMPMEENPA AETSVVTSRQ SQPDLHAKSD IMSDLTDQSA VSNVVDLDKV RAEHGQQMRN EAQAIVDLCA LAGMPDLAGG YIAEGQSAEA VRKELLAKRA DAEEIHSEVM PGDGTRMQPR QSLETNPVVA SCRKLAGQ
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