Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2541 |
Symbol | |
ID | 4483856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3231760 |
End bp | 3233994 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639723289 |
Product | DNA topoisomerase III |
Protein accession | YP_866447 |
Protein GI | 117925830 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.111653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0440835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTCT ATCTTTGCGA AAAGCCCTCT CAGGGTCGGG ATATTGGCCG CGTTTTAGGG GCTACCAGCC GTCATGAAGG TTATGTGGCA GGAGCAGGGG TGTGCGTAAC TTGGTGTATT GGTCATCTTA TGGAGATGGT GGCCCCTGAT GGTTATAGAC CCGAATGGAA AAGTTGGCGG CTGGATACCC TACCCATCAT TCCCCAACAG TGGCAGCTGG AGCTCACCGC CCGTGGGCGC AAGCAGTTTA AGGTTATCCA AGGGTTACTC AAGGGTGTAA CGGAGGTGGT GCTCGCCACC GACGCCGACC GCGAAGGTGA GACCATTGGC CGTGAAGTGT TGGAGCGCTG CCAATACCGG GGTAAGATCT CTCGCCTCTG GTTATCTGCC CTGGATGATG CCAGCATTCG CAAAGCGTTG GGCAACCTGC TACCAGGGGA GCAAACCGAG CCCCTCTACC AAGCCGGGCT TGGCCGATCT CGTGCGGATT GGATGGTTGG GATGAACCTT ACCCGCGCCT ATACCCTTTT GGGTCGGCAG GGGGGCTATG CAGGGGTGTT GAGCGTGGGG CGCGTGCAAA CCCCCACCCT AAAACTGGTG GTGGACCGGG ACCGGCTGAT CGAGAACTTT AAACCCGTCG ACTATTTTGA GATTTTTGCC TTACACCGCG TTCACTCAGG GACGTTCATC GCCAAATGGG TACCGCCCCC TAAGCCTTGC GATGCCGAGG GTCACTGCTT GGACCGCACC CTCGCCGAAA CGGTCATACA CAAGGTGCAA GGCCACAGCG GCACCATTAC AAAAGCCGAG ACCAAGCGCG TCAAAGAGCC GCCCCCGCTG CCATTGGAGC TCTCGACTCT GCAACAAGAG GCTTCGCGGC GCTGGGGCAT GGGTGCCAAA CAGACCCTTG AGATTGCCCA ATCCCTTTAT GAAAAGCATA AAGCGGTGAC CTATCCCCGC ACCGATTGCC GTTATCTACC CAGCAACCAG TTTAAAGAGG CCCCGGCGGT ACTACAGGGA TTGACAACCA ACGATGCCAG CCTCACCCCC TTGGTGGAGG GTGCAGATGC ACAGCTCCGC TCCAAGGCGT GGAACGACAA AAAAATCACC GCTCACCATG CCATCATTCC AACCGCCGCC AAGATAAACA TCGACGCCCT CAGCCGCGAA GAGGCTCTGC TGTATGATCT GATTCGCCGT CACTACTTGG CGCAATTTTA CCCCCCCTTC GAGTATGACC GCACGGTAAT CGACACCCAG GTCGCCATGG AAACATTCCA CGCCACAGGC CGGGTTGAGC TCATTCCAGG GTGGAAAAGG GTGCTGGCTG CCAACCAAGA AAAAAAAGAG GGCGACGAGG ATGAGCAAAC GTTACCCGTG GTACGCAGCG GCGAAGCTGC CACCATTGAG GGGGCTGAAC TGAAACAAAA GCAGACCAAG CCTCCCAACC GTTATACCGA AGGCACCTTA ATCCAGGCGA TGAAAAGCGT CGGCAAGCTG GTCGAAGATG CCCGTCTACG CAAGATTTTA AGAGAGACCT CGGGCATTGG CACAGAGGCC ACCCGTGCCG CCATTCTGGA GACCTTGATT AAACGCAATC TGCTGGCCAA GCAGGGCAAA AAAAGTCTTG TTAGCATGCC CGCCGGTCGT CTGCTGGTGG ATGCCCTACC CCATAGCGTC ACCGACCCCG CCACCACCGC AGTCTGGGAA CAGACCCTGG ATGATATTGC CCATGGTGGA GGATCGCTGG AGACCTTTTT AGCCAAATCC GAGTTATGGC TTAATAAGCT TATTCACAAT GTTCACCAAC GCCAGCAGCT GGGACTAAAC CCCTTTCGAG GTCTCCCCCC TTCCACGTCG CATACCGACC CAGCCCAGCC CACTCCGCGC AGGCAACGCC GCTCTAAAGC AGAGGTCACA CCCACCCCAA ACGCCGCCCC CCTGTGCCCC CAGTGTGGCG GGCCTATGTT ACAGCGTAAA AGCCCGCAAG GCGCTTTTTG GAGCTGTGCA GAGCAAGCAA CCTGTACGGG CACACGGCCA GGGAGCCCCC TTGCAGCCCA CTCGCCCCTT ATGCAACCCA ACCCAGAGCG CGGACCTCTT TGCCCCAAGT GCCAACAAGC CCCCCTGGTA CAGCGCACCG CCTATCGCGG CAAAAATAGC GGCCAACCTT TCTGGGGCTG CCAGCGTTAC CCCCAGTGCC GCTACACCCA AGCCAGCCAA ACCACAGAGT CATAA
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Protein sequence | MILYLCEKPS QGRDIGRVLG ATSRHEGYVA GAGVCVTWCI GHLMEMVAPD GYRPEWKSWR LDTLPIIPQQ WQLELTARGR KQFKVIQGLL KGVTEVVLAT DADREGETIG REVLERCQYR GKISRLWLSA LDDASIRKAL GNLLPGEQTE PLYQAGLGRS RADWMVGMNL TRAYTLLGRQ GGYAGVLSVG RVQTPTLKLV VDRDRLIENF KPVDYFEIFA LHRVHSGTFI AKWVPPPKPC DAEGHCLDRT LAETVIHKVQ GHSGTITKAE TKRVKEPPPL PLELSTLQQE ASRRWGMGAK QTLEIAQSLY EKHKAVTYPR TDCRYLPSNQ FKEAPAVLQG LTTNDASLTP LVEGADAQLR SKAWNDKKIT AHHAIIPTAA KINIDALSRE EALLYDLIRR HYLAQFYPPF EYDRTVIDTQ VAMETFHATG RVELIPGWKR VLAANQEKKE GDEDEQTLPV VRSGEAATIE GAELKQKQTK PPNRYTEGTL IQAMKSVGKL VEDARLRKIL RETSGIGTEA TRAAILETLI KRNLLAKQGK KSLVSMPAGR LLVDALPHSV TDPATTAVWE QTLDDIAHGG GSLETFLAKS ELWLNKLIHN VHQRQQLGLN PFRGLPPSTS HTDPAQPTPR RQRRSKAEVT PTPNAAPLCP QCGGPMLQRK SPQGAFWSCA EQATCTGTRP GSPLAAHSPL MQPNPERGPL CPKCQQAPLV QRTAYRGKNS GQPFWGCQRY PQCRYTQASQ TTES
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